Gene SNSL254_A1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1627 
Symbol 
ID6483501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1592791 
End bp1593183 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID642737013 
Producthypothetical protein 
Protein accessionYP_002040765 
Protein GI194444002 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC AGGTGGCTGC ATTTTTAAGT TTTCTGATAA TGCCTTACGC GCTAGCGGAT 
GATCAAGGGG GATTAAAAAA AGACGTGGCA CCGCCGCCGC CTCATGCTAT TGAGGATGGT
TATCGCGGTA CGGATGATGC AGAAAAAATG ACCATCGAAC AGGCGAAAAC CCTGCATGAT
GGCGCGACCG TTTCGCTGCG CGGCAACCTT ATTGATCATA AAGGCGACGA TCGCTATGTA
TTTCGTGATA AATCCGGCGA GATTAACGTG ATAATTCCTT CCGCCGTATT TGATGGGCGG
GAAGTTCAGC CGGATCAAAT GATCAACATT AACGGTAGTC TGGACAAGAA AGCGAAGGAA
CCACTTGTTC GCGTGAACCG ACTGCAAAAA TAA
 
Protein sequence
MKLQVAAFLS FLIMPYALAD DQGGLKKDVA PPPPHAIEDG YRGTDDAEKM TIEQAKTLHD 
GATVSLRGNL IDHKGDDRYV FRDKSGEINV IIPSAVFDGR EVQPDQMINI NGSLDKKAKE
PLVRVNRLQK