Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1624 |
Symbol | |
ID | 6483942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1589148 |
End bp | 1591190 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642737010 |
Product | dipeptidyl carboxypeptidase II |
Protein accession | YP_002040762 |
Protein GI | 194444337 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGA ATCCTTTGTT AGACCAGAGT ATGTTGCCCT ATCAGGCACC GCGTTTTGAT CGGATCAAAG ATTGCCATTA TCGTCCTGCT TTTGATGAGG GCGTGCGGCA AAAACGCGTG GAAATCGAGG CCATCGTCAA TCATCCGGCG GCCCCTGATT TTACGAATAC GCTTCTGGCG CTGGAGCAAA GCGGGGCGCT TCTGTCACGC GTCACCAGCG TTTTTTTCGC GATGACGGCC GCGCACACTA ACGATGAACT CCAGCGGTTG GATGAGGCCT TTTCTGCCGA GCTGGCGGCG CTCTCCAACG ATATTTATCT GAATAGCGCG TTATTCGCTC GCGTGGATGC CGTCTGGCAA CAGCGTCACT CACTGGGGCT GGATGATGAG TCGCTACGGT TGGTCGATGT GATCCATCAG CGTTTTGTGT TGGCAGGCGC GCAGCTTGCC GAAGAGGATA AAGCGCGACT GAAAGTATTG AATACTGAAT CCGCGACCTT AATGAGTCAG TTTAATCAGC GTCTGCTGGC GGCAAGTAAA GCGGGCGGGC TGGCGGTCGA TGACGCGCAT TGCCTGGCAG GATTAAGCCC GGAAGAAATG ACCGTCGCTG CTGAAGCGGC GCGTGAAAAA GGCCTGGAGG AGCGCTGGTT CATTCCGCTC CTTAATACGA CGCAACAGCC TGCGCTTGCT ACGCTGCGCG ATCGCCAGAC TCGCGAAAAT TTATTCGCAG CGTCATGGAC TCGGGCGGAA AAAGGAGATG CCCACGATAC CCGCGCTATC GTTCAGCGTC TGGTAGAGAT TCGTCGCTGT CAGGCAAAAC TGCTGGGTTT CCCTAATTAT GCCGCATGGA AAATGGCCGA TCAGATGGCG AAAACGCCGC AAGCCGCACT GAGCTTTATG CGTGGCATTG TGCCGCCAGC GCGTCAGCGT GTACTCAATG AACAGGCGGA AATTCAGAAC GTCATTGATG GTGAGCAGGG CGGCTACACC GTTCAGGCCT GGGACTGGAT GTTCTATGCC GAACAGGTAC GGCGGGAAAA ATATGCGTTA GATGAAGCGC AACTGAAGCC CTATTTTGCC TTAAATACGG TCTTGCAAGA AGGGGTTTTC TGGACCGCCA ACCAGCTATT CGGCATCACC TTCGTCGAGC GTTTTGACAT TCCGGTGTAT CACCCTGATG TTCGGGTGTG GGAGATTTTC GATTCCGATG GTGTCGGCAT GGCGTTATTT TATGGCGACT TCTTCGCGCG GGACTCGAAA AGCGGCGGCG CGTGGATGGG GAATTTTGTC GAGCAATCCA CACTCAATGA AACCCGGCCC GTTATATACA ATGTATGTAA CTATCAGAAA CCGGTTGATG GGCAGCCTGC ATTACTGCTT TGGGACGACG TTATTACGCT CTTCCATGAG TTTGGTCATA CGTTACATGG TTTGTTTGCC GTTCAGCGCT ATGCCACGCT TTCAGGTACC AATACGCCCC GCGACTTTGT CGAGTTTCCC TCCCAGATTA ATGAGCATTG GGCGAGCCAT CCACGCGTGT TCGAACGCTA CGCGCGTCAT GTCGACAGCG GTGAAAAAAT GCCCGCTGAT TTACAGGAAA AAATGCGCAA GGCGAGTTTA TTTAATAAAG GTTACGATAT GACTGAATTG CTCGGCGCCG CATTGCTGGA TATGCGCTGG CATATGCTGG AGGAGAGCGT AGCAGAGCAG TCTGTCGCTG AGTTCGAGCA GCAGGCGCTG GCCGCCGAGC ATCTTGATTT ACCGGCAGTG CCGCCCCGCT ATCGCAGCAG TTATTTTGCC CATATCTTCG GCGGCGGCTA CGCAGCGGGA TACTACGCCT ACCTGTGGAC GCAAATGTTA GCGGATGACG GTTATCAATG GTTTGTAGAG CAGGGCGGCC TGACGCGTGA AAACGGGCAG CGTTTTCGTG ATGCTATCCT TTCCCGGGGG AATAGTACTG ATTTAGAAAC GCTTTATTCA GCCTGGCGTG GACATGAACC GCATATTGAC CCCATGTTGC AATATCGTGG GCTCGATCGC TAA
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Protein sequence | MSMNPLLDQS MLPYQAPRFD RIKDCHYRPA FDEGVRQKRV EIEAIVNHPA APDFTNTLLA LEQSGALLSR VTSVFFAMTA AHTNDELQRL DEAFSAELAA LSNDIYLNSA LFARVDAVWQ QRHSLGLDDE SLRLVDVIHQ RFVLAGAQLA EEDKARLKVL NTESATLMSQ FNQRLLAASK AGGLAVDDAH CLAGLSPEEM TVAAEAAREK GLEERWFIPL LNTTQQPALA TLRDRQTREN LFAASWTRAE KGDAHDTRAI VQRLVEIRRC QAKLLGFPNY AAWKMADQMA KTPQAALSFM RGIVPPARQR VLNEQAEIQN VIDGEQGGYT VQAWDWMFYA EQVRREKYAL DEAQLKPYFA LNTVLQEGVF WTANQLFGIT FVERFDIPVY HPDVRVWEIF DSDGVGMALF YGDFFARDSK SGGAWMGNFV EQSTLNETRP VIYNVCNYQK PVDGQPALLL WDDVITLFHE FGHTLHGLFA VQRYATLSGT NTPRDFVEFP SQINEHWASH PRVFERYARH VDSGEKMPAD LQEKMRKASL FNKGYDMTEL LGAALLDMRW HMLEESVAEQ SVAEFEQQAL AAEHLDLPAV PPRYRSSYFA HIFGGGYAAG YYAYLWTQML ADDGYQWFVE QGGLTRENGQ RFRDAILSRG NSTDLETLYS AWRGHEPHID PMLQYRGLDR
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