| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1610 |
|---|
| Symbol | |
|---|
| ID | 6482421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1576414 |
|---|
| End bp | 1578852 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642736996 |
|---|
| Product | anaerobic dimethyl sulfoxide reductase chain a |
|---|
| Protein accession | YP_002040748 |
|---|
| Protein GI | 194444065 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.462198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAG AAAAGCAACA AACAGGCGTT AGCCGCAGGA CGTTAGTGAA ATCAGCGGCG
CTTGGCTCAC TGGCGCTGGC TGCCGGAGGC GTATCTTTAC CGTTTGGGAT GCGTACCGCG
GCCGCGGCGG TGCAGCAGGC TATGCGCAAC GAAGAAGATA AAATCGTCTG GGGCGCCTGT
TCGGTCAACT GCGGCAGTCG CTGCGCCCTG CGTCTGCATG TAAAAGATAA TGAAGTCTGG
TGGGTTGAAA CTGATAACAC TGGCGACGAT GTCTACGGCA ATCATCAGGT TCGCGCCTGC
CTGCGGGGCC GTTCAATCCG TCGGCGTATT AACCATCCGG ATCGCCTTAA CTATCCCATG
AAACGCGTTG GCCGCCGCGG CGAAGGCAAA TTTGAACGCA TTAGCTGGCA GGAAGCGCTG
GACACTATTA GCGCCAGCCT GAAAAAGACC GTAGAGACCT ACGGCAATGA AGCCGTTTAT
ATCCACTATT CATCCGGCAT CGTAGGCGGC AACATAACCC GCTCGTCGCC TGCCGCCTCG
CCGGTGAAGC GTTTGATGAA CTGCTACGGC GGTTCGTTGA ATCAATACGG CTCATACAGT
ACCGCGCAAA TTTCTTGCGC CATGCCCTAC ACCTATGGTT CCAACGACGG CAACAGCACA
TCTGATATCG AAAACAGTAA ACTGGTGGTC ATGTTCGGCA ATAATCCGGC TGAAACACGC
ATGAGCGGCG GCGGCATTAC CTGGTTTCTG GAGCAAGCGC GTGAACGCTC AAATGCGCGC
ATGATCGTAA TAGATCCGCG CTATACCGAT ACCGCTGCCG GACGTGAAGA CGAGTGGATA
CCGATTCGCC CCGGCACCGA TGCCGCGCTG GTGGCGGGAA TTGCCTGGGT ATTGATTAAC
GAAAATCTCG TTGACCAGCC TTTTCTCGAT AACTATTGCA TCGGCTACGA TGAAAAGACC
CTTCCGGCTG ACGCGCCCCC CAATGGCCAT TATAAGGCTT ATATTTTGGG CCAGGGCGAG
GACGGTATCG CCAAAACGCC GCAGTGGGCA TCGCATATTA CCGGCATCCC CGCCGATCGG
ATTATCAAAC TGGCGCGCGA GATAGGCAGC GTCAAGCCGG CCTACATCTG TCAGGGTTGG
GGCCCGCAGC GTCAGGCGAA CGGCGAACAA ACCGCTCGCG CCATCGCCAT GTTACCGATT
CTGACCGGCA ACGTCGGCAT TCATGGCGGT AATAGCGGCG CACGCGAATC CACTTACACC
ATTACCATTG AACGTCTGCC GGTCCTGGAG AATCCCGTTA AAACCGCCAT CTCCTGCTTT
AGCTGGACGG ACGCCATTGC GCGCGGCCCG GAAATGACCG CCCTGCGCGA CGGCGTACGC
GGCAAAGATA AGCTGGATGT CCCGATCAAA TTTCTATGGA ACTACGCTGG CAACACCCTG
ATTAATCAGC ATTCGGATAT TAATAAAACC CATGAAATTC TTCAGGATGA AGCGAAATGC
GAAATGATTG TGGTCATCGA CAATTTTATG ACCTCTTCCG CGAAGTACGC TGATATTTTA
CTGCCGGATC TCATGACCGT CGAACAGGAG GATATCATCC CCAATGATTA CGCCGGCAAT
ATGGGATATC TGATTTTTAT CCAACCGGCG ACGACGCCTA AGTTTGAACG CAAGCCCATC
TACTGGGTAC TCAGCGAAAT CGCCAGACGC CTCGGCGACG ATGTGTATCA GCGGTTTACC
GAAGGCCGTA CACAGGCGCA ATGGCTGCAA TATCTGTACG CCAAAATGCA GGCAAGAGAT
CCGGCATTGC CCGCGTATGA CGATCTGAAA AAAATGGGCA TCTATAAACG CAAAGATCCC
AACGGCCACT TTGTCGCCTA TAAAAAATTT CGTGAAGATC CGCAGGCCAA TCCGTTAAAA
ACGCCGTCCG GTAAAATCGA AATCTACTCG AGCAAACTCG CTCACATCGC CAGTACCTGG
GAGCTGGCGG AAGGTGACGT GATAAGCCCA CTGCCGATTT ATACCCCTAC TTTTGAAGGA
TGGGACGATC CGAAGCGGAG CACCTTCCCG CTACAGCTGT TTGGCTTTCA CTATAAATCC
CGTACCCATT CAAGCTACGG CAATATTGAT GTTCTGCAGG CCGCCTGTCG CCAAGAGGTG
TGGATAAATC CGCTCGATGC GCAAAAACGC GGTATCGCGA ATGGCGATAA GGTTCGCGTC
TTTAACGATC GTGGAGAGGT GCGTCTACCC GCCAAAGTCA CGCCGCGTAT TCTGCCGGGC
GTCAGCGCGA TGGGTCAGGG CGCATGGCAT AATGCGGATA TGGCTGGCGA TAAAATTGAC
CACGGCGCCT GCATCAATAC GCTCACGACG CTGCGTCCTT CCCCCCTGGC AAAAGGGAAT
CCTCAACATA CAAATCTGGT GGAAATCGAA AAAATCTAA
|
|---|
| Protein sequence | MPGEKQQTGV SRRTLVKSAA LGSLALAAGG VSLPFGMRTA AAAVQQAMRN EEDKIVWGAC
SVNCGSRCAL RLHVKDNEVW WVETDNTGDD VYGNHQVRAC LRGRSIRRRI NHPDRLNYPM
KRVGRRGEGK FERISWQEAL DTISASLKKT VETYGNEAVY IHYSSGIVGG NITRSSPAAS
PVKRLMNCYG GSLNQYGSYS TAQISCAMPY TYGSNDGNST SDIENSKLVV MFGNNPAETR
MSGGGITWFL EQARERSNAR MIVIDPRYTD TAAGREDEWI PIRPGTDAAL VAGIAWVLIN
ENLVDQPFLD NYCIGYDEKT LPADAPPNGH YKAYILGQGE DGIAKTPQWA SHITGIPADR
IIKLAREIGS VKPAYICQGW GPQRQANGEQ TARAIAMLPI LTGNVGIHGG NSGARESTYT
ITIERLPVLE NPVKTAISCF SWTDAIARGP EMTALRDGVR GKDKLDVPIK FLWNYAGNTL
INQHSDINKT HEILQDEAKC EMIVVIDNFM TSSAKYADIL LPDLMTVEQE DIIPNDYAGN
MGYLIFIQPA TTPKFERKPI YWVLSEIARR LGDDVYQRFT EGRTQAQWLQ YLYAKMQARD
PALPAYDDLK KMGIYKRKDP NGHFVAYKKF REDPQANPLK TPSGKIEIYS SKLAHIASTW
ELAEGDVISP LPIYTPTFEG WDDPKRSTFP LQLFGFHYKS RTHSSYGNID VLQAACRQEV
WINPLDAQKR GIANGDKVRV FNDRGEVRLP AKVTPRILPG VSAMGQGAWH NADMAGDKID
HGACINTLTT LRPSPLAKGN PQHTNLVEIE KI
|
|---|
| |