Gene SNSL254_A1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1608 
SymboldmsB_2 
ID6486800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1573252 
End bp1573869 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID642736994 
Productdimethylsulfoxide reductase, B subunit 
Protein accessionYP_002040746 
Protein GI194442787 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC AGTATGGATT TTTTATTGAT TCCAGTCGTT GCACCGGTTG CAAAACCTGC 
GAACTGGCCT GCAAGGACTA CAAAGATCTC ACTCCCGACG TCAGTTTCCG GCGGATATAT
GAATACGCAG GTGGCGACTG GCAGGAAGAT AACGGCGTCT GGCACCAGAA CGTCTTTGCC
TACTATCTCT CCATCTCCTG TAACCACTGC GAAGACCCGG CCTGTACCAA AGTCTGCCCG
AGCGGCGCGA TGCACAAGCG CGATGACGGT TTTGTGGTGG TGGATGAAGA CGTCTGTATC
GGCTGTCGCT ACTGCCACAT GGCCTGCCCG TACGGCGCGC CGCAGTACAA CGCCGCCAAA
GGTCATATGA CTAAGTGCGA TGGCTGTCAT GATCGCGTCG CCGACGGCAA AAAGCCTATC
TGCGTGGAAT CCTGCCCGTT ACGGGCGCTG GATTTCGGCC CGATAGACGA GCTGCGTAAA
AAACACGGTG AGCTGGCTGC CGTCGCGCCG CTGCCGCGCG CGCATTTCAC GAAGCCGAAT
ATTGTGATTA AACCCAACGC CAACAGCCGC CCGACCGGGG ACACTACCGG TTATCTGGCC
AATCCGAAGG AGGTATAA
 
Protein sequence
MTTQYGFFID SSRCTGCKTC ELACKDYKDL TPDVSFRRIY EYAGGDWQED NGVWHQNVFA 
YYLSISCNHC EDPACTKVCP SGAMHKRDDG FVVVDEDVCI GCRYCHMACP YGAPQYNAAK
GHMTKCDGCH DRVADGKKPI CVESCPLRAL DFGPIDELRK KHGELAAVAP LPRAHFTKPN
IVIKPNANSR PTGDTTGYLA NPKEV