| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1604 |
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| Symbol | |
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| ID | 6484928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1569790 |
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| End bp | 1570692 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736990 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_002040742 |
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| Protein GI | 194446205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCA AAAAACACCT GTTGGGATGG CTTGCCGCAA CGCTGTTGTT CAGTAGCCAG
ACGCAGGCCG CGCCGCTGGT TCTCGCCACC AAAAGCTTTA CCGAGCAGCA TATTCTTTCC
GCTATGACCG TTCAGTATTT GCAGAAGAAA GGCTTTCAGG TTCAGCCGCA AACCAATATC
GCCGCGGTAA TTTCACGTAA TGCGATGGTG AATAAACAAA TTGATATTAC CTGGGAATAC
ACCGGTACAT CGCTGATTAT TTTCAACCGT ATCGATAAGC GCATGAGTCC ACAGGAAACC
TACGACACGG TAAAACGCCT GGATGCGAAG CTGGGCCTGG TATGGCTCAA ACCGGCTGAC
ATGAACAATA CTTACGCGTT CGCGATGCAG CGCAAACGCG CCGAGTCGGA AAATATCACC
ACCATCTCGC AAATGGTGGC AAAAATCGAA CAGGTCCGGC AGAACGATCC TGACCACAAC
TGGATGCTCG GTCTCGATCT GGAATTTGCC GGGCGCAGCG ATGGGATGAA GCCCCTTCAG
CAAGCCTACC AAATGCAGCT TGATCGCCCG CAAATACGAC AGATGGACCC AGGGCTGGTC
TATAACGCCG TTCGGGATGG GCTGGTTGAC GCCGGGCTGG TCTATACCAC CGACGGACGG
GTGAAAGGGT TTGATCTGAA AGTGCTGGAA GATGATAAAG GCTTCTTTCC AAGTTACGCT
GTCACGCCCG TGGTGCGTAA AGAGGTGCTG GAAGCCAATC CTGGCCTTGA TGACGCCTTA
AACACCCTTT CCGGCCTGCT CAATAACGAT GTGATATCGA CCCTAAACGC CCAAGTCGAT
ATCGAGCATC GCACGCCGCA ACAGGTAGCC CATCAATTTT TGCAGGACAA AGGTCTGCTG
TAA
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| Protein sequence | MRFKKHLLGW LAATLLFSSQ TQAAPLVLAT KSFTEQHILS AMTVQYLQKK GFQVQPQTNI
AAVISRNAMV NKQIDITWEY TGTSLIIFNR IDKRMSPQET YDTVKRLDAK LGLVWLKPAD
MNNTYAFAMQ RKRAESENIT TISQMVAKIE QVRQNDPDHN WMLGLDLEFA GRSDGMKPLQ
QAYQMQLDRP QIRQMDPGLV YNAVRDGLVD AGLVYTTDGR VKGFDLKVLE DDKGFFPSYA
VTPVVRKEVL EANPGLDDAL NTLSGLLNND VISTLNAQVD IEHRTPQQVA HQFLQDKGLL
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