Gene SNSL254_A1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1592 
Symbol 
ID6483298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1559712 
End bp1560074 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content45% 
IMG OID642736978 
Productmultidrug efflux system protein MdtJ 
Protein accessionYP_002040730 
Protein GI194445916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.999303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTACT GGATTTTATT AGCTCTGGCT ATCGCGACTG AAATTACCGG CACGCTCTCA 
ATGAAATGGG CTAGCGTGGG TAATGGCAAT GCGGGTTTTA TTTTAATGCT GGTGATGATC
ACGCTGTCAT ATATATTTCT TTCTTTTGCG GTAAAAAAGA TTGCCCTGGG TGTAGCGTAT
GCCTTATGGG AAGGGATCGG CATTTTATTT ATTACCATTT TTAGCGTGCT GCTATTTGAT
GAAGCATTAT CAACCATGAA GATTGCCGGC TTGCTGACGC TGGTCGCCGG CATAGTATTG
ATCAAATCAG GGACGCGTAA ACCCGGCAAA CCGGTGAAGG AGGCGACTCG TGCAACAATT
TGA
 
Protein sequence
MFYWILLALA IATEITGTLS MKWASVGNGN AGFILMLVMI TLSYIFLSFA VKKIALGVAY 
ALWEGIGILF ITIFSVLLFD EALSTMKIAG LLTLVAGIVL IKSGTRKPGK PVKEATRATI