Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1590 |
Symbol | tqsA |
ID | 6484197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1558260 |
End bp | 1559294 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642736976 |
Product | putative transport protein |
Protein accession | YP_002040728 |
Protein GI | 194443521 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CGATCATCAC GCTCAATGGT CTAAAAATCG TCATTATGCT GGGAATGCTG GTGGTTATTC TGAGCGGTAT CCGCTTCGCC GCAGATATCA TTGTTCCCTT TATTTTGGCG TTATTTATTG CGGTCGTTCT CAATCCCGTT GTGCAACGGA TGACCCGATG TCGAATTCCG CGCGTTATCG CCGTGTCATT GCTCATTGTG ATTATTGTCA TGCTAATGGT ACTGCTACTG GCCTATTTGG GGACATCATT AAATGAACTG GCCCGTACCC TACCGCAGTA TCGCTCCTCA TTGGTGATAC CGTTGCAACG TATCGAACCG TGGTTGCAGC GAGCAGGCAT TGGCGTGTCG GTTGATGAGC TGGCGAAATA TATCGATCCA AACGCCGCAA TGACTCTGGT AACGAACCTG CTCACCCAGC TGTCCAATGC CATGTCGTCC ATCTTTTTAT TGTTATTGAC CGTGGTATTT ATGCTGCTGG AGGTTCCACA ATTGCCTGAA AAACTGCAGC AGATGATGAG CCGTCCGGTG GAGGGCATGG CGGCAATTCA ACGCGCGCTT GATAGCGTTT CCCATTATCT GGTGCTAAAA ACAGCGATCA GTATCGTGAC GGGACTGGTC GCATGGGGAA TGCTGGCCGC GCTGGATGTC CGCTTCGCCT TTGTCTGGGG ACTACTGGCC TTCGCGCTGA ACTATATTCC TAATATTGGA TCGGTGCTCG CTGCCCTGCC GCCCATTATT CAGGTGCTGG TATTTAACGG GTTTTATGAT GCGCTGCTGG TGCTGGCAGG CTATCTGCTG ATTAATCTGG TCTTCGGCAA TATCCTTGAG CCACGAATCA TGGGACGTGG TTTAGGCCTT TCAACCTTAG TGGTATTTTT GTCGTTAATT TTCTGGGGCT GGCTATTAGG TCCGGTGGGC ATGCTGCTCT CCGTTCCGTT AACCATCATT GTCAAAATCG CCCTCGAACA GACCACCGGC GGGCAGAGTA TCGCCGTTCT GCTTAGCGAT TTAAACAAAA GATAA
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Protein sequence | MAKPIITLNG LKIVIMLGML VVILSGIRFA ADIIVPFILA LFIAVVLNPV VQRMTRCRIP RVIAVSLLIV IIVMLMVLLL AYLGTSLNEL ARTLPQYRSS LVIPLQRIEP WLQRAGIGVS VDELAKYIDP NAAMTLVTNL LTQLSNAMSS IFLLLLTVVF MLLEVPQLPE KLQQMMSRPV EGMAAIQRAL DSVSHYLVLK TAISIVTGLV AWGMLAALDV RFAFVWGLLA FALNYIPNIG SVLAALPPII QVLVFNGFYD ALLVLAGYLL INLVFGNILE PRIMGRGLGL STLVVFLSLI FWGWLLGPVG MLLSVPLTII VKIALEQTTG GQSIAVLLSD LNKR
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