Gene SNSL254_A1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1579 
Symboltus 
ID6483195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1544843 
End bp1545772 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642736965 
ProductDNA replication terminus site-binding protein 
Protein accessionYP_002040717 
Protein GI194443108 
COG category 
COG ID 
TIGRFAM ID[TIGR02648] DNA replication terminus site-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.275809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.641882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT ACGATCTCGT TGAACGCCTG AATGGCACTT TTCGCCAGAT AGAACAACAC 
CTGGCGGCGC TGACGGATAA TCTACAGCAG CATTCGCTAC TTATCGCCCG TGTCTTTTCA
CTGCCGCAGG TGACCAAAGA GGCGGAACAT GCGCCGCTGG ATACTATCGA GGTAACGCAA
CATCTGGGGA AAGAGGCCGA AGCGCTGGCG CTACGTCACT ATCGCCATTT GTTTATTCAA
CAGCAGTCCG AAAACCGCAG CAGTAAAGCC GCCGTCCGCC TGCCTGGCGT CTTATGCTAT
CAAGTGGATA ATGCGACACA GTTAGATCTG GAAAATCAGA TACAGCGCAT TAACCAGTTG
AAAACCACCT TCGAGCAGAT GGTTACGGTA GAGTCCGGTC TTCCCTCAGC GGCACGTTTT
GAGTGGGTGC ATCGGCATCT ACCCGGCTTA ATTACGCTGA ACGCTTACCG CACGCTGACG
CTTATCAATA ACCCCGCCAC CATACGTTTC GGCTGGGCAA ATAAACATAT TATTAAAAAT
TTAAGCCGGG ATGAGGTTCT GAGCCAGTTG AAAAAAAGCC TCGCGTCGCC GCGCAGCGTC
CCGCCGTGGA CGCGCGAACA ATGGCAATTC AAGCTGGAAC GGGAATATCA GGATATCGCT
GCCTTACCGC AGCAGGCCCG ACTCAAGATT AAGCGTCCGG TTAAAGTACA GCCGATCTCC
CGCATCTGGT ATAAAGGCCA GCAGAAACAG GTGCAACACG CCTGCCCCAC GCCGATTATC
GCATTAATCA ACACGGACAA CGGCGCTGGC GTGCCGGATA TTGGCGGGCT GGAAAACTAT
GACGCCGACA ATATTCAGCA CCGTTTTAAA CCACAGGCGC AGCCGCTGCG ACTGATTATT
CCGCGACTGC ACCTGTATGT GGCGGATTAA
 
Protein sequence
MSRYDLVERL NGTFRQIEQH LAALTDNLQQ HSLLIARVFS LPQVTKEAEH APLDTIEVTQ 
HLGKEAEALA LRHYRHLFIQ QQSENRSSKA AVRLPGVLCY QVDNATQLDL ENQIQRINQL
KTTFEQMVTV ESGLPSAARF EWVHRHLPGL ITLNAYRTLT LINNPATIRF GWANKHIIKN
LSRDEVLSQL KKSLASPRSV PPWTREQWQF KLEREYQDIA ALPQQARLKI KRPVKVQPIS
RIWYKGQQKQ VQHACPTPII ALINTDNGAG VPDIGGLENY DADNIQHRFK PQAQPLRLII
PRLHLYVAD