Gene SNSL254_A1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1576 
SymbolmanA 
ID6486273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1540254 
End bp1541429 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content55% 
IMG OID642736962 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_002040714 
Protein GI194444393 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.714022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.668804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC TCATTAACTC AGTGCAAAAC TATGCCTGGG GAAGTAAAAC TGCGTTAACG 
GAACTTTATG GCATCGCCAA TCCGCAGCAG CAGCCAATGG CTGAACTCTG GATGGGCGCG 
CATCCCAAAA GCAGCTCGCG AATCACCACC GCCAACGGCG AAACCGTCTC CCTGCGTGAC 
GCCATCGAAA AGAATAAAAC CGCCATGCTG GGCGAAGCGG TAGCCAACCG TTTCGGCGAA 
CTGCCGTTTC TGTTTAAAGT ACTGTGCGCC GCGCAGCCGT TATCTATTCA GGTGCACCCG 
AATAAGCGCA ACTCCGAAAT CGGTTTCGCG AAAGAAAATG CGGCGGGTAT CCCCATGGAT 
GCCGCAGAGC GGAACTATAA AGATCCTAAC CATAAACCAG AGCTGGTTTT TGCCCTGACG 
CCTTTCCTGG CGATGAACGC GTTCCGCGAA TTTTCTGACA TTGTCTCTTT ACTGCAACCT 
GTCGCCGGCG CGCATTCCGC TATCGCCCAC TTTTTGCAGG CGCCGAACGC TGAACGTCTG 
AGCCAGCTTT TCGCCAGCCT GTTGAATATG CAAGGCGAAG AAAAATCCCG CGCGTTAGCC 
GTACTCAAAG CGGCGCTTAA CAGCCAGCAA GGCGAACCGT GGCAAACGAT CCGCGTGATT 
TCAGAGTATT ATCCTGACGA CAGCGGGCTT TTCTCTCCTT TGTTGCTGAA TGTGGTCAAA 
CTGAATCCCG GCGAGGCGAT GTTCCTGTTT GCCGAAACGC CTCATGCTTA TCTGCAGGGC 
GTTGCGCTGG AAGTCATGGC GAACTCCGAT AACGTTCTGC GCGCTGGCCT TACGCCAAAA 
TATATCGACA TCCCTGAGCT GGTCGCGAAC GTGAAGTTCG AACCTAAGCC TGCCGGCGAG 
TTGCTGACTG CCCCGGTAAA AAGCGGCGCG GAGCTGGACT TCCCAATTCC GGTTGACGAT 
TTTGCTTTTT CACTGCACGA CCTGGCGCTT CAGGAGACGA GCATCGGCCA ACACAGCGCC 
GCGATTCTGT TCTGCGTTGA GGGTGAGGCG GTGTTACGTA AAGATGAACA GCGTCTGGTA 
CTGAAGCCGG GTGAATCGGC CTTTATCGGC GCGGATGAGT CTCCGGTTTA CGCCAGCGGC 
ACGGGCCGTT TAGCGCGTGT TTATAACAAG CTGTAG
 
Protein sequence
MQKLINSVQN YAWGSKTALT ELYGIANPQQ QPMAELWMGA HPKSSSRITT ANGETVSLRD 
AIEKNKTAML GEAVANRFGE LPFLFKVLCA AQPLSIQVHP NKRNSEIGFA KENAAGIPMD 
AAERNYKDPN HKPELVFALT PFLAMNAFRE FSDIVSLLQP VAGAHSAIAH FLQAPNAERL 
SQLFASLLNM QGEEKSRALA VLKAALNSQQ GEPWQTIRVI SEYYPDDSGL FSPLLLNVVK 
LNPGEAMFLF AETPHAYLQG VALEVMANSD NVLRAGLTPK YIDIPELVAN VKFEPKPAGE 
LLTAPVKSGA ELDFPIPVDD FAFSLHDLAL QETSIGQHSA AILFCVEGEA VLRKDEQRLV 
LKPGESAFIG ADESPVYASG TGRLARVYNK L