| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1564 |
|---|
| Symbol | |
|---|
| ID | 6485812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1528632 |
|---|
| End bp | 1529324 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642736951 |
|---|
| Product | electron transport complex RsxE subunit |
|---|
| Protein accession | YP_002040703 |
|---|
| Protein GI | 194445440 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
|---|
| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.257712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.0772811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA TAAAAGACAT TGTTGTTCAG GGGTTATGGA AAAATAACTC TGCTCTGGTG
CAGCTACTTG GCCTGTGCCC TTTACTGGCG GTGACGTCTA CGGCAACCAA CGCTCTGGGG
CTGGGTCTGG CCACGACGCT GGTATTAACG CTGACCAACC TTACGGTGTC CGCACTACGT
CGCTGGACGC CGGCAGAAAT CCGTATCCCG ATTTACGTTA TGATCATTGC TTCGGTGGTA
AGCGCAGTAC AGATGCTGAT CAATGCGTAT GCGTTCGGTT TGTATCAGTC TTTAGGGATT
TTTATTCCGT TGATTGTAAC GAACTGCATT GTTGTTGGTC GCGCCGAAGC GTTTGCCGCG
AAAAAAGGAC CGTGGCTTTC CGCGTTGGAC GGTTTTTCCA TCGGCATGGG CGCGACAGGC
GCGATGTTCG TGCTGGGCTC ACTGCGCGAG ATCCTCGGGA ATGGTACGCT TTTCGATGGC
GCGGATAGCC TGCTGGGAAG CTGGGCAAAA GTATTACGGG TCGAGATATT TCACACCGAC
TCGCCTTTTC TGCTGGCGAT GCTGCCGCCA GGCGCGTTTA TCGGTCTGGG ACTCATGCTG
GCGGTAAAAT ATCTTATTGA TGAAAAAATG AAGAAACGCC GCGCCGAAAC CGCGCCTTCC
GCTGTTCCGG CCGGTGAAAC AGGGAAAGTC TGA
|
|---|
| Protein sequence | MSEIKDIVVQ GLWKNNSALV QLLGLCPLLA VTSTATNALG LGLATTLVLT LTNLTVSALR
RWTPAEIRIP IYVMIIASVV SAVQMLINAY AFGLYQSLGI FIPLIVTNCI VVGRAEAFAA
KKGPWLSALD GFSIGMGATG AMFVLGSLRE ILGNGTLFDG ADSLLGSWAK VLRVEIFHTD
SPFLLAMLPP GAFIGLGLML AVKYLIDEKM KKRRAETAPS AVPAGETGKV
|
|---|
| |