| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1558 |
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| Symbol | pdxH |
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| ID | 6486589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1522144 |
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| End bp | 1522800 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642736945 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_002040697 |
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| Protein GI | 194443113 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.574434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATA ACGACCAATT GCAGCAGATC GCGCATCTGC GCCGTGAATA TACGAAAGGC
GGCTTGCGTC GCCGCGATTT ACCCGCTGAA CCGTTAACCT TATTTGAGCG CTGGCTTGGG
CAAGCGTGCG ACGCGCGACT GGCCGATCCG ACGGCAATGG TCGTGGCGAC CGTAGATGAC
AAGGGGCAAC CGTACCAGCG TATTGTATTG CTCAAGCATT ATGATGAAAA AGGCCTGGTC
TTTTATACCA ACCTGGGAAG CCGCAAGGCG CATCAAATTG AGCACAATCC GCGTATCAGC
CTGTTATTTC CCTGGCATAT GCTTGAACGC CAGGTGATGG TGACAGGCAA AGCCGAGCGT
CTCTCCACTC TTGAGGTGGT GAGGTATTTC CACAGCCGTC CGCGCGACAG CCAGATCGGC
GCATGGGTCT CTAAACAATC CAGCCGCATT TCCGCGCGCG GTATCCTCGA AAGCAAATTC
CTGGAGCTTA AGCAGAAGTT TCAACAGGGC GAAGTGCCGC TACCCAGCTT CTGGGGCGGT
TTTCGCGTGA GTATTGAACA GATGGAGTTC TGGCAGGGCG GCGAACATCG TCTGCACGAT
CGCTTTTTAT ACCAACGCGA CGACGGCGCA TGGAAAATCG ACCGTCTTGC GCCCTAA
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| Protein sequence | MSDNDQLQQI AHLRREYTKG GLRRRDLPAE PLTLFERWLG QACDARLADP TAMVVATVDD
KGQPYQRIVL LKHYDEKGLV FYTNLGSRKA HQIEHNPRIS LLFPWHMLER QVMVTGKAER
LSTLEVVRYF HSRPRDSQIG AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG
FRVSIEQMEF WQGGEHRLHD RFLYQRDDGA WKIDRLAP
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