Gene SNSL254_A1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1554 
Symbol 
ID6485678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1519320 
End bp1519760 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID642736941 
Producttranscriptional regulator SlyA 
Protein accessionYP_002040693 
Protein GI194445848 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG AATCGCCACT AGGTTCTGAT CTGGCACGGT TGGTGCGCAT TTGGCGTGCT 
CTGATTGACC ATCGCCTCAA GCCTCTGGAA TTGACGCAGA CACATTGGGT CACGTTGCAC 
AATATTCATC AATTGCCGCC TGACCAGTCG CAGATTCAAT TGGCTAAAGC GATAGGCATT 
GAGCAGCCAT CGCTGGTACG CACGTTGGAT CAACTTGAAG ATAAGGGGCT AATTTCGCGG 
CAAACCTGCG CCAGCGATCG TCGCGCTAAG CGCATTAAAC TGACCGAGAA AGCGGAGCCG 
CTGATCGCTG AGATGGAAGC GGTCATTCAT AAAACGCGCG GTGAAATTTT GGCTGGGATT 
TCTTCAGAGG AGATTGAGCT TCTGATTAAA CTTATCGCCA AACTTGAACA CAATATTATG 
GAATTGCACT CTCACGATTG A
 
Protein sequence
MKLESPLGSD LARLVRIWRA LIDHRLKPLE LTQTHWVTLH NIHQLPPDQS QIQLAKAIGI 
EQPSLVRTLD QLEDKGLISR QTCASDRRAK RIKLTEKAEP LIAEMEAVIH KTRGEILAGI 
SSEEIELLIK LIAKLEHNIM ELHSHD