Gene SNSL254_A1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1551 
Symbol 
ID6486672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1515987 
End bp1518026 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content56% 
IMG OID642736938 
Productfusaric acid resistance domain protein 
Protein accessionYP_002040690 
Protein GI194446531 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT CCCTGCCAGC CCTGCGAAAT ACGCCCTGGT TTAAAGCGAC CTCCGGCCAG 
TGGCGTTACG CGTTGCGCAA TACCATTGCC ATGTGTCTCG CGCTGACATT CGCTTATTAT
CTCAATCTGG ATGAGCCCTA CTGGGCGATG ACTTCGGCCG CAGTGGTGAG CTTTCCGACC
GTAGGCGGCG TAATCAGTAA AAGTCTGGGG CGTATTGCCG GGAGTTTACT CGGCGCGACC
GCCGCGTTGA TTATTGCCGG CCATACGCTG AATGAACCCT GGTTGTTCTT ATTTAGCATG
GCCGTCTGGA TCGGTTTTTG TACCTGGGCC TGCGCGCATT TTACCAATAA TGCCGCTTAT
GCTTTCCAGT TGTCCGGCTA CACGGCGGCG ATCATCGCGT TCCCGATGGT TAATATTGTA
GAAATCACGC AGTTGTGGGA TATCGCCCAG GCACGTGTAT GTGAAGTTAT CGTCGGCATC
CTCTGTGGCG GCATGATGAT GATGATCCTA CCCAGCACAT CGGATGGTAC CGCCCTGCTC
ACCGCGTTGA AAAACATGCA TGCGCGCTTG CTGGAACATG CCAGTCTACT GTGGCAGCCG
GAGACTACCG ACGCTATCCG CTCCGCGCAT GAGGGGGTCA TTGGGCAAAT CCTGACCATG
AACCTGCTGC GTATTCAGGC CTTCTGGAGT CACTACCGTT TTCGCCGCCA GAATGCATTG
CTAAATGCAT TGTTACACCA GCAATTACGG CTAACCAGCG TGATCTCCAG TCTGCGTAGA
ATGCTTTTAA ATTGGCCGAC GCCGCCGGAA AACAGCCGCG AAGTCATTGA ACAACTCTTA
GCTGAGTTGG CAAAACCGCG CGCGGACAGC TACACCGTGG CGCGGATTAT TGCGCCGCTA
CGCCCGCAGG ATGAACAGGA TTATCGTCAC CTCGCGTTCT GGCAGCGATT ACGCTATTTT
TGCCAGCTAT ATCTGCGCAG CAGCCGTCAG TTATATCTGA TCGAAAGCGG CGCGCCGGTA
GATCAAATCC ATATCCGCCG CACTCCCGGC CTTGCGCGGC ATACGGATAA CGCAGAGGCC
ATCTGGAGCG GCGTGCGTAC CTTTTGCACG CTCACGGTAA TTGGCGCCTG GAGTATTGGC
GCGCAATGGG AATCCGGGCC CGGCGCATTA ACCCTGGCGG CGATCAGTTG CGTCCTCTAC
TCCATCGTCG CCACGCCGTT TAAGTCGCTT TCCTTATTGA TGCGTACTTT AGTGCTGCTG
TCCTTATTCA GCTTCGTGGT GAAATTTGGC CTGATGGTGC AAATCACCGA TCTGTGGCAA
TTCTTGCTTT TCCTTTTTCC GCTGTTCGTC ACGATGCAAC TGCTTAAACT GCAGATGCCT
AAGCTGGCGG GACTGTGGGG GCAGCTTATC GTTTTTATGG GCTCATTCAT CGCCGTGACC
AATCCACCGG TGTACGACTT CGCCGACTTC CTTAACGATA ATACCGCCAA GATCGTCGGC
GTCGCGATTT CCTGGCTGGC GTTTGCGATT TTGCGCCCCG GTTCCGATGC CGTAAAAAGC
CGCCGCCATA TCCGCGCGCT ACGCCGGGAT TTCGTCGATC AGCTTAGCCG TCACCCTTCC
CATAACGAAA GCGAGTTTGA ATCGCTGACC TATCATCACG TCAGTCAGCT CAGCAATAGT
CAGGATGCGC TGGCGCGCCG GTGGTTATTA CGTTGGGGAG TGGTGCTGCT GAACTGCTCG
CATGTGGTGT GGCAGCTGCG CGCCTGGGAG TCGCGTTCCG ATCCGCTTTC CCGGGTGCGG
GATATTTGTA TATCCCTGCT GCGCGATGTG ATGAGCGAGC GCGGCGTGCA GCAACGCCCG
CTTGCCGTCA CGCTACAGGA ATTACAGCGT ATCTGCGACA CGCTCGCACA TCATCATCAA
CCCGCCGCGC ATGAGCTGGC GGCGATTATC TGGCGTTTAC ACTGTTCGCT GTCGCAGCTG
GAACAGGCTC CAGCGCAGGG AACACTGTCT CCGGGTTATT TAATGACGCC GCAGGCGTAA
 
Protein sequence
MKLSLPALRN TPWFKATSGQ WRYALRNTIA MCLALTFAYY LNLDEPYWAM TSAAVVSFPT 
VGGVISKSLG RIAGSLLGAT AALIIAGHTL NEPWLFLFSM AVWIGFCTWA CAHFTNNAAY
AFQLSGYTAA IIAFPMVNIV EITQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSTSDGTALL
TALKNMHARL LEHASLLWQP ETTDAIRSAH EGVIGQILTM NLLRIQAFWS HYRFRRQNAL
LNALLHQQLR LTSVISSLRR MLLNWPTPPE NSREVIEQLL AELAKPRADS YTVARIIAPL
RPQDEQDYRH LAFWQRLRYF CQLYLRSSRQ LYLIESGAPV DQIHIRRTPG LARHTDNAEA
IWSGVRTFCT LTVIGAWSIG AQWESGPGAL TLAAISCVLY SIVATPFKSL SLLMRTLVLL
SLFSFVVKFG LMVQITDLWQ FLLFLFPLFV TMQLLKLQMP KLAGLWGQLI VFMGSFIAVT
NPPVYDFADF LNDNTAKIVG VAISWLAFAI LRPGSDAVKS RRHIRALRRD FVDQLSRHPS
HNESEFESLT YHHVSQLSNS QDALARRWLL RWGVVLLNCS HVVWQLRAWE SRSDPLSRVR
DICISLLRDV MSERGVQQRP LAVTLQELQR ICDTLAHHHQ PAAHELAAII WRLHCSLSQL
EQAPAQGTLS PGYLMTPQA