Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1551 |
Symbol | |
ID | 6486672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1515987 |
End bp | 1518026 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736938 |
Product | fusaric acid resistance domain protein |
Protein accession | YP_002040690 |
Protein GI | 194446531 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCT CCCTGCCAGC CCTGCGAAAT ACGCCCTGGT TTAAAGCGAC CTCCGGCCAG TGGCGTTACG CGTTGCGCAA TACCATTGCC ATGTGTCTCG CGCTGACATT CGCTTATTAT CTCAATCTGG ATGAGCCCTA CTGGGCGATG ACTTCGGCCG CAGTGGTGAG CTTTCCGACC GTAGGCGGCG TAATCAGTAA AAGTCTGGGG CGTATTGCCG GGAGTTTACT CGGCGCGACC GCCGCGTTGA TTATTGCCGG CCATACGCTG AATGAACCCT GGTTGTTCTT ATTTAGCATG GCCGTCTGGA TCGGTTTTTG TACCTGGGCC TGCGCGCATT TTACCAATAA TGCCGCTTAT GCTTTCCAGT TGTCCGGCTA CACGGCGGCG ATCATCGCGT TCCCGATGGT TAATATTGTA GAAATCACGC AGTTGTGGGA TATCGCCCAG GCACGTGTAT GTGAAGTTAT CGTCGGCATC CTCTGTGGCG GCATGATGAT GATGATCCTA CCCAGCACAT CGGATGGTAC CGCCCTGCTC ACCGCGTTGA AAAACATGCA TGCGCGCTTG CTGGAACATG CCAGTCTACT GTGGCAGCCG GAGACTACCG ACGCTATCCG CTCCGCGCAT GAGGGGGTCA TTGGGCAAAT CCTGACCATG AACCTGCTGC GTATTCAGGC CTTCTGGAGT CACTACCGTT TTCGCCGCCA GAATGCATTG CTAAATGCAT TGTTACACCA GCAATTACGG CTAACCAGCG TGATCTCCAG TCTGCGTAGA ATGCTTTTAA ATTGGCCGAC GCCGCCGGAA AACAGCCGCG AAGTCATTGA ACAACTCTTA GCTGAGTTGG CAAAACCGCG CGCGGACAGC TACACCGTGG CGCGGATTAT TGCGCCGCTA CGCCCGCAGG ATGAACAGGA TTATCGTCAC CTCGCGTTCT GGCAGCGATT ACGCTATTTT TGCCAGCTAT ATCTGCGCAG CAGCCGTCAG TTATATCTGA TCGAAAGCGG CGCGCCGGTA GATCAAATCC ATATCCGCCG CACTCCCGGC CTTGCGCGGC ATACGGATAA CGCAGAGGCC ATCTGGAGCG GCGTGCGTAC CTTTTGCACG CTCACGGTAA TTGGCGCCTG GAGTATTGGC GCGCAATGGG AATCCGGGCC CGGCGCATTA ACCCTGGCGG CGATCAGTTG CGTCCTCTAC TCCATCGTCG CCACGCCGTT TAAGTCGCTT TCCTTATTGA TGCGTACTTT AGTGCTGCTG TCCTTATTCA GCTTCGTGGT GAAATTTGGC CTGATGGTGC AAATCACCGA TCTGTGGCAA TTCTTGCTTT TCCTTTTTCC GCTGTTCGTC ACGATGCAAC TGCTTAAACT GCAGATGCCT AAGCTGGCGG GACTGTGGGG GCAGCTTATC GTTTTTATGG GCTCATTCAT CGCCGTGACC AATCCACCGG TGTACGACTT CGCCGACTTC CTTAACGATA ATACCGCCAA GATCGTCGGC GTCGCGATTT CCTGGCTGGC GTTTGCGATT TTGCGCCCCG GTTCCGATGC CGTAAAAAGC CGCCGCCATA TCCGCGCGCT ACGCCGGGAT TTCGTCGATC AGCTTAGCCG TCACCCTTCC CATAACGAAA GCGAGTTTGA ATCGCTGACC TATCATCACG TCAGTCAGCT CAGCAATAGT CAGGATGCGC TGGCGCGCCG GTGGTTATTA CGTTGGGGAG TGGTGCTGCT GAACTGCTCG CATGTGGTGT GGCAGCTGCG CGCCTGGGAG TCGCGTTCCG ATCCGCTTTC CCGGGTGCGG GATATTTGTA TATCCCTGCT GCGCGATGTG ATGAGCGAGC GCGGCGTGCA GCAACGCCCG CTTGCCGTCA CGCTACAGGA ATTACAGCGT ATCTGCGACA CGCTCGCACA TCATCATCAA CCCGCCGCGC ATGAGCTGGC GGCGATTATC TGGCGTTTAC ACTGTTCGCT GTCGCAGCTG GAACAGGCTC CAGCGCAGGG AACACTGTCT CCGGGTTATT TAATGACGCC GCAGGCGTAA
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Protein sequence | MKLSLPALRN TPWFKATSGQ WRYALRNTIA MCLALTFAYY LNLDEPYWAM TSAAVVSFPT VGGVISKSLG RIAGSLLGAT AALIIAGHTL NEPWLFLFSM AVWIGFCTWA CAHFTNNAAY AFQLSGYTAA IIAFPMVNIV EITQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSTSDGTALL TALKNMHARL LEHASLLWQP ETTDAIRSAH EGVIGQILTM NLLRIQAFWS HYRFRRQNAL LNALLHQQLR LTSVISSLRR MLLNWPTPPE NSREVIEQLL AELAKPRADS YTVARIIAPL RPQDEQDYRH LAFWQRLRYF CQLYLRSSRQ LYLIESGAPV DQIHIRRTPG LARHTDNAEA IWSGVRTFCT LTVIGAWSIG AQWESGPGAL TLAAISCVLY SIVATPFKSL SLLMRTLVLL SLFSFVVKFG LMVQITDLWQ FLLFLFPLFV TMQLLKLQMP KLAGLWGQLI VFMGSFIAVT NPPVYDFADF LNDNTAKIVG VAISWLAFAI LRPGSDAVKS RRHIRALRRD FVDQLSRHPS HNESEFESLT YHHVSQLSNS QDALARRWLL RWGVVLLNCS HVVWQLRAWE SRSDPLSRVR DICISLLRDV MSERGVQQRP LAVTLQELQR ICDTLAHHHQ PAAHELAAII WRLHCSLSQL EQAPAQGTLS PGYLMTPQA
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