| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1538 |
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| Symbol | |
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| ID | 6482441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1505113 |
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| End bp | 1506318 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642736925 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_002040677 |
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| Protein GI | 194443109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0173263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTG GAAAAGGTTT TTTAGTCTGG TTAGCCGGTC TTAGCGTACT GGGATTTCTG
GCTACGGACA TGTACCTGCC CGCGTTTGCC GCCATACAGG CGGATTTACA AACGCCTGCC
GCCGCGGTCA GCGCCAGCCT CAGCCTGTTT TTAGCTGGCT TTGCCGTCGC GCAACTCCTC
TGGGGACCGC TATCGGATCG TTATGGCCGT AAACCGATTT TACTGCTGGG GTTATCTATC
TTTGCACTCG GAAGTCTGGG GATGCTGTGG GTAGAAAGCG CGGCAGCACT GCTGACGCTG
CGCTTCGTGC AGGCCGTCGG CGTTTGCGCG GCAACGGTAA TCTGGCAAGC GCTGGTGACC
GATTATTATC CTTCGCAAAA AATTAACCGT ATCTTCGCCA CGATCATGCC ACTGGTGGGC
TTATCCCCGG CGCTTGCGCC CTTACTGGGA AGCTGGATAC TGACGCATTT CTCATGGCAG
GCGATTTTCG CCACCCTGTT CGTGATTACG TTGTTGCTGA TGTTGCCGGC GCTGCGCTTA
AAACCATCGG TAAAAGCGCG TACCGAGGGA CAGGATAAAC TCACTTTCGT GACGTTGTTA
CGCTCTAAAA CCTATCGCGG TAATGTGCTG ATTTATGCCG CCTGTTCCGC CAGCTTTTTT
GCGTGGCTAA CAGGGTCCCC GTTTATTCTC AGCGCGATGG GTTACAGCCC GGCAGTGATT
GGCCTGAGCT ATGTTCCGCA AACCATCGCT TTTCTGATTG GCGGATATGG TTGCCGCGCG
GCGCTACAAA AATGGCAGGG CTACCAATTG CTTCCGTGGC TGTTAGGGCT GTATGCGCTG
AGCGTTATCG CCACCTGGGG AGCGGGCCTT CTGAATAATG CCTCACTGGT GAAGATCCTG
ATTCCTTTCT GCGTAATGGC GATTGCTAAT GGCGCCATCT ACCCTATCGT CGTCGCGCAA
GCGTTACGCC CTTTCCCTCA AGCCACGGGA CGCGCTGCGG CGCTACAAAA TACGCTGCAA
CTGGGGTTAT GTTTCCTGGC AAGCCTGGTG GTTTCATGGC TCATCAGCAC GCCGCTGCTG
ACCACCACCA GCGTAATGCT CTCTACCGTT GTTCTGGCGG CGTTAGGTTA CAAAATGCAG
TCTCATGCAG ATTGCGCTGA GGCCGAATTT CCCCATGCCA ATGTCGCCCA CGACAAGTCT
CACTAA
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| Protein sequence | MQPGKGFLVW LAGLSVLGFL ATDMYLPAFA AIQADLQTPA AAVSASLSLF LAGFAVAQLL
WGPLSDRYGR KPILLLGLSI FALGSLGMLW VESAAALLTL RFVQAVGVCA ATVIWQALVT
DYYPSQKINR IFATIMPLVG LSPALAPLLG SWILTHFSWQ AIFATLFVIT LLLMLPALRL
KPSVKARTEG QDKLTFVTLL RSKTYRGNVL IYAACSASFF AWLTGSPFIL SAMGYSPAVI
GLSYVPQTIA FLIGGYGCRA ALQKWQGYQL LPWLLGLYAL SVIATWGAGL LNNASLVKIL
IPFCVMAIAN GAIYPIVVAQ ALRPFPQATG RAAALQNTLQ LGLCFLASLV VSWLISTPLL
TTTSVMLSTV VLAALGYKMQ SHADCAEAEF PHANVAHDKS H
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