| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1532 |
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| Symbol | |
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| ID | 6483112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1499871 |
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| End bp | 1500929 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642736919 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_002040673 |
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| Protein GI | 194445677 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.371934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA AAACAGAACA GCCTACAGAA AAGAAATTAC GTGATGGCCG TAAGGAAGGG
CAGGTTGTCA AAAGTATTGA AATAACATCA TTATTTCAGC TGATTGCGCT TTATTTGTAT
TTTCATTTCT TTACTGAAAA GATGATTTTG ATACTGATTG AGTCAATAAC TTTCACATTA
CAATTAGTAA ATAAACCATT TTCTTATGCA TTAACGCAAT TGAGCCATGT TTTAATAGAG
TCATTGGCTT CTGTACTGCT GTTTCTGGGC GCTGGGGTAA TAGTTGCTAC TGTGGGTAGC
GTGTTTCTTC AGGTGGGGGT GGTTATTGCC AGCAAGGCCA TAGGTTTTAA AAGCGAGCAT
ATAAATCCGG TAAGTAATTT TAAGCAGATA TTCTCTTTAC ATAGCGTAGT AGAATTATGT
AAATCCAGCC TAAAAGTTAT CATGTTATCT CTTATCTTTG CCTTTTTCTT TTATTATTAT
GCCAGTACTT TTCGGGCGCT ACCGTACTGT GGGTTAGCCT GTGGCGTGCT TGTGGTTTCT
TCTTTAATAA AATGGTTATG GGTAGGGGTG ATGGCTTTTT ATATCGTCGT TGGCATACTG
GACTATTCTT TTCAATATTA TAAGATTAGA AAAGATCTAA AAATGAGTAA AGATGACGTA
AAACAAGAGC ATAAAGATCT GGAGGGCGAC CCTCAAATGA AGACACGGCG TCGGGAAATG
CAGAGTGAAA TACAAAGTGG GAGTTTAGCT CAATCTGTTA AACAATCTGT TGCGGTAGTG
CGTAACCCAA CGCATATTGC GGTTTGTCTT GGCTATCATC CCACCGATAT GCCAATACCA
CGCGTCCTGG AAAAAGGCAG TGATGCTCAA GCTAACTATA TTGTTAACAT CGCTGAACGC
AACTGCATCC CCGTTGTTGA AAATGTTGAG CTGGCCCGCT CATTATTTTT TGAAGTGGAA
CGCGGAGATA AAATTCCTGA AACGTTATTT GAACCCGTTG CAGCCTTGTT ACGTATGGTG
ATGAAGATAG ATTATGCGCA TTCTACCGAA ACACCATAA
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| Protein sequence | MSEKTEQPTE KKLRDGRKEG QVVKSIEITS LFQLIALYLY FHFFTEKMIL ILIESITFTL
QLVNKPFSYA LTQLSHVLIE SLASVLLFLG AGVIVATVGS VFLQVGVVIA SKAIGFKSEH
INPVSNFKQI FSLHSVVELC KSSLKVIMLS LIFAFFFYYY ASTFRALPYC GLACGVLVVS
SLIKWLWVGV MAFYIVVGIL DYSFQYYKIR KDLKMSKDDV KQEHKDLEGD PQMKTRRREM
QSEIQSGSLA QSVKQSVAVV RNPTHIAVCL GYHPTDMPIP RVLEKGSDAQ ANYIVNIAER
NCIPVVENVE LARSLFFEVE RGDKIPETLF EPVAALLRMV MKIDYAHSTE TP
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