| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1520 |
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| Symbol | |
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| ID | 6486064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1489717 |
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| End bp | 1490466 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642736907 |
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| Product | type III secretion apparatus lipoprotein YscJ/HrcJ family |
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| Protein accession | YP_002040661 |
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| Protein GI | 194446558 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTC ATCGTATAGT ATTTCTTACT GTCCTTACGT TCTTTCTTAC GGCATGTGAT
GTGGATCTTT ATCGCTCATT GCCAGAAGAT GAGGCGAATC AAATGCTGGC ATTACTTATG
CAGCATCATA TTGATGCGGA AAAAAAACAG GAAGAGGATG GTGTAACCTT ACGTGTCGAG
CAGTCGCAGT TTATTAATGC GGTTGAGCTA CTTAGACTTA ACGGTTATCC GCATAGGCAG
TTTACAACGG CGGATAAGAT GTTTCCGGCT AATCAGTTAG TGGTATCACC CCAGGAAGAA
CAGCAGAAGA TTAATTTTTT AAAAGAACAA AGAATTGAAG GAATGCTGAG TCAGATGGAG
GGCGTGATTA ATGCAAAAGT GACCATTGCG CTACCGACTT ATGATGAGGG AAGTAACGCT
TCTCCGAGCT CAGTTGCCGT ATTTATAAAA TATTCACCTC AGGTCAATAT GGAGGCCTTT
CGGGTAAAAA TTAAAGATTT AATAGAGATG TCAATCCCTG GGTTGCAATA CAGTAAGATT
AGTATCTTGA TGCAGCCTGC TGAATTCAGA ATGGTACCTG ATGTACCCGC GAGACAAACA
TTCTGGATTA TGGACGTGAT CAACGCCAAT AAAGGGAAGG TGGAGAAGTG GTTGATGAAA
TACCCTTATC AGTTGATGTT ATCGTTGACA GGACTGTTAT TAGGAGTGGG CATCCTGATC
GGCTATTTTT GCCTGAGACG CCGTTTTTGA
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| Protein sequence | MKVHRIVFLT VLTFFLTACD VDLYRSLPED EANQMLALLM QHHIDAEKKQ EEDGVTLRVE
QSQFINAVEL LRLNGYPHRQ FTTADKMFPA NQLVVSPQEE QQKINFLKEQ RIEGMLSQME
GVINAKVTIA LPTYDEGSNA SPSSVAVFIK YSPQVNMEAF RVKIKDLIEM SIPGLQYSKI
SILMQPAEFR MVPDVPARQT FWIMDVINAN KGKVEKWLMK YPYQLMLSLT GLLLGVGILI
GYFCLRRRF
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