Gene SNSL254_A1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1502 
Symbol 
ID6482275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1473569 
End bp1474528 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID642736889 
Producthypothetical protein 
Protein accessionYP_002040643 
Protein GI194446666 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000000133408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACA AACCCGTAGT CGGCATTAGC GGATGTCTGA CTGGCGCCAC GGTACGCTTT 
GATGGCGGAC ATAAGCGTAT GGATTTTGTC ATGAACTCTC TGGCGCCGTG GGTGGCCTAC 
AAACCGATCT GCCCGGAGGT GGCGATCGGC CTGCCCGTGC CCCGCCCTGC GCTGCGTCTT 
ATCCAGACGA CCTGTGGCGA CATTCGGATG CGCTATAGCC ATGCCCCGCA CGATGACGTC 
ACCGAGCGAA TGAATGCCTT TGCTGATCGG TTTCTGCCAA CAATAGGCGA ACTGGCGGGG 
TTTATTGTGT GTGCAAAATC GCCCAGTTGC GGAATGGAGC GCGTTCGCCT GTATGATGAA 
AAGGGTAACA GGGGCCGCAA AGCTGGCACG GGGCTGTTTA CCGCCGCGAT GATGGACAAA 
TATCCCTGGC TGCCGATAGA GGAAGATGGT CGCCTGCACG ATCCGGTACT ACGCGAGAAT 
TTCATCGCAC GTATCTTCGC GCTACATGAA TTAAATGCGC TACGCGCGCA GGGCTTGAGT 
CGTCACAGTT TGCTCGCGTT TCATAGCCGA TACAAACTTC AGCTTCTCGC CCACCACCAG 
GCCGGCTACC GCGAAATTGG CCCTTTCGTC GCGCGTCTGC ATGAGTGGGA CGATCTGGAT 
GCCTTCTTTG TCCGATACAG AGAAAAACTG ATGGCTATCC TGCGCCACCC CGCTTCACGT 
AAAAATCACA CCAATGTGCT GATGCATATC CAGGGCTATT TTCACCGCGC GTTGAACAGC 
AGGCAACGCG CGGAATTACG CGAGGTGATT CTCGGCTACC GGGCGGGCCG ACTACCTATC 
CTGGCACCGT TAACGCTGCT GAAGCACTAT CTGGCGGAAC ATCCGGATGA CTATCTACGC 
AGCCAGAATT ATTTTGAGCC GTACCCTGAT ACATTAGGGC TGCGCTTAGC CATCACCTGA
 
Protein sequence
MNNKPVVGIS GCLTGATVRF DGGHKRMDFV MNSLAPWVAY KPICPEVAIG LPVPRPALRL 
IQTTCGDIRM RYSHAPHDDV TERMNAFADR FLPTIGELAG FIVCAKSPSC GMERVRLYDE 
KGNRGRKAGT GLFTAAMMDK YPWLPIEEDG RLHDPVLREN FIARIFALHE LNALRAQGLS 
RHSLLAFHSR YKLQLLAHHQ AGYREIGPFV ARLHEWDDLD AFFVRYREKL MAILRHPASR 
KNHTNVLMHI QGYFHRALNS RQRAELREVI LGYRAGRLPI LAPLTLLKHY LAEHPDDYLR 
SQNYFEPYPD TLGLRLAIT