Gene SNSL254_A1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1494 
Symbol 
ID6482975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1463472 
End bp1464209 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID642736881 
Producthypothetical protein 
Protein accessionYP_002040635 
Protein GI194442290 
COG category[S] Function unknown 
COG ID[COG5426] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.596585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000000000000749394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTT TATTTATTGG CGAATCCTGG CACATTCATA TGATTCACTC TAAAGGTTTT 
GATAGCTTTA CATCGAGCAA ATACGAAGAA GGCGCAGACT ATTTATTATC CTGCTTACGC 
CAGGGTAATA TCGATGTAGA CTACATGCCT GCCCATATTG TGCAAACTCG TTTTCCACAA 
ACCGCCGAAG CATTAGCCTG CTATGATGCG ATCGTCATCA GTGATATCGG TAGCAATACG 
TTCCTGCTAC AAAACAGAAC GTTTTATAAT ATGGACATTA TTCCTGATGC ATTACAACTT 
ATCGCCGATT ATGTTGCTGA GGGCGGCGGT CTGTTGATGA TCGGCGGGTA TTTATCCTTT 
ACGGGAATAG AAGCAAAAGC CAATTATAAA AATACGGTTC TGGCGGAGGT ATTGCCGGTT 
GATATGCTGG ATGTAGATGA CCGCGTAGAA CTACCGCAAG GATGTAAAGC AGTAAATACT 
GCGGTAGAGC ATGTTATTAC CCAGCCATTT AGCGAATGGC CGCCGCTGTT GGGCTATAAC 
AAGCTTATCG CCAAAGAAAA TAGTCAAGTC CTTGCTGAAA TTAATGGCGA TCCACTGTTA 
GTTATGGGTA CTTACCATAA AGGGAAAGTA TGTTGCTTTG CCAGTGATTG TTCGCCGCAC 
TGGGGAAGCC CGCAGTTTCT GCAATGGGAA CATTACGCCA CCTTCTGGTG TAATGTTTTA 
CACACAATAA AAAAATAA
 
Protein sequence
MKILFIGESW HIHMIHSKGF DSFTSSKYEE GADYLLSCLR QGNIDVDYMP AHIVQTRFPQ 
TAEALACYDA IVISDIGSNT FLLQNRTFYN MDIIPDALQL IADYVAEGGG LLMIGGYLSF 
TGIEAKANYK NTVLAEVLPV DMLDVDDRVE LPQGCKAVNT AVEHVITQPF SEWPPLLGYN 
KLIAKENSQV LAEINGDPLL VMGTYHKGKV CCFASDCSPH WGSPQFLQWE HYATFWCNVL 
HTIKK