| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1491 |
|---|
| Symbol | pykF |
|---|
| ID | 6483506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1459341 |
|---|
| End bp | 1460753 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642736879 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_002040633 |
|---|
| Protein GI | 194445372 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0197868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00000000000000413859 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CGAAAATTGT TTGTACTATC GGTCCGAAAA CCGAATCCGA AGAGATGTTA
AGCAAAATGC TGGACGCGGG CATGAACGTG ATGCGTCTGA ACTTCTCTCA TGGCGATTAT
GCAGAACACG GTCAGCGTAT CCAGAATTTG CGCAACGTGA TGAGCAAAAC TGGTAAAAAA
GCCGCTATTC TGCTTGATAC TAAAGGACCA GAAATCCGCA CCATTAAACT GGAAGGCGGT
AACGACGTTT CGCTGAAAGC GGGCCAAACC TTTACTTTTA CCACCGACAA ATCCGTGGTC
GGTAATAATG AAATCGTTGC CGTCACCTAT GAAGGCTTTA CCAGCGACCT GAGCGTTGGC
AACACCGTCC TGGTTGACGA TGGTCTGATC GGTATGGAAG TGACCGCCAT CGAAGGCAAT
AAAGTCATTT GTAAGGTGCT GAACAACGGC GATCTGGGCG AGAACAAAGG CGTTAACCTG
CCGGGCGTTT CTATTGCTCT GCCGGCGCTG GCTGAAAAAG ACAAACAGGA CCTGATCTTC
GGTTGCGAAC AGGGCGTTGA CTTTGTTGCG GCGTCCTTTA TCCGTAAACG TTCTGACGTT
GTCGAAATTC GCGAGCATCT GAAAGCTCAC GGCGGCGAAA ATATCCAGAT TATCTCTAAG
ATCGAAAACC AGGAAGGCCT GAACAACTTC GATGAAATTC TCGAAGCTTC CGACGGCATC
ATGGTTGCGC GTGGCGACCT GGGCGTAGAA ATCCCGGTTG AAGAAGTGAT TTTTGCGCAG
AAAATGATGA TCGAAAAATG TATCCGCGCA CGTAAAGTCG TGATCACCGC GACTCAGATG
CTGGATTCTA TGATCAAAAA CCCGCGTCCG ACCCGCGCAG AAGCAGGCGA CGTTGCGAAC
GCCATCCTCG ACGGTACGGA TGCGGTTATG CTGTCCGGCG AATCCGCAAA AGGGAAATAC
CCGCTGGAAG CCGTTTCTAT CATGGCGACC ATCTGCGAAC GTACCGACCG CGTCATGAAC
AGCCGTCTGG ACTACAACAA CGACAGCCGT AAACTGCGCA TTACGGAAGC AGTATGCCGC
GGCGCGGTAG AAACCGCCGA AAAACTGGAA GCGCCGCTGA TCGTGGTAGC GACCCAGGGC
GGTAAATCCG CTCGCGCCGT GCGTAAATAC TTCCCGGACG CCACCATCCT GGCATTGACC
ACCAATGAAG TGACCGCCCG TCAGTTAGTA CTGAGCAAAG GCGTGGTATC GCAGCTGGTG
AAAGAAATCA ATTCTACTGA TGATTTCTAC CGTCTGGGCA AAGATGTCGC CCTGCAAAGC
GGCCTCGCCC AGAAAGGCGA CGTCGTAGTG ATGGTCTCCG GCGCGCTGGT TCCAAGCGGC
ACCACTAACA CCGCCTCTGT TCACGTACTG TAA
|
|---|
| Protein sequence | MKKTKIVCTI GPKTESEEML SKMLDAGMNV MRLNFSHGDY AEHGQRIQNL RNVMSKTGKK
AAILLDTKGP EIRTIKLEGG NDVSLKAGQT FTFTTDKSVV GNNEIVAVTY EGFTSDLSVG
NTVLVDDGLI GMEVTAIEGN KVICKVLNNG DLGENKGVNL PGVSIALPAL AEKDKQDLIF
GCEQGVDFVA ASFIRKRSDV VEIREHLKAH GGENIQIISK IENQEGLNNF DEILEASDGI
MVARGDLGVE IPVEEVIFAQ KMMIEKCIRA RKVVITATQM LDSMIKNPRP TRAEAGDVAN
AILDGTDAVM LSGESAKGKY PLEAVSIMAT ICERTDRVMN SRLDYNNDSR KLRITEAVCR
GAVETAEKLE APLIVVATQG GKSARAVRKY FPDATILALT TNEVTARQLV LSKGVVSQLV
KEINSTDDFY RLGKDVALQS GLAQKGDVVV MVSGALVPSG TTNTASVHVL
|
|---|
| |