| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1486 |
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| Symbol | |
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| ID | 6483082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1455600 |
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| End bp | 1456820 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642736874 |
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| Product | bifunctional cysteine desulfurase/selenocysteine lyase |
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| Protein accession | YP_002040628 |
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| Protein GI | 194442460 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.199299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.000000000797081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATTTC CTGTAGAAAA AGTACGGGCG GATTTTCCCA TACTGCAGCG TGAAGTTAAC
GGCCTGCCGC TGGCTTACCT GGACAGCGCA GCCAGCGCTC AAAAACCTAA TCAGGTGATT
GATGCTGAAT CTGCCTTCTA CCGTCACGGC TATGCTGCGG TACATCGGGG TATCCATACG
TTAAGCGCGC AGGCGACCGA AAGCATGGAG AATGTGCGTA AGCAGGCGTC GCGGTTTATT
AACGCCCGCT CCGCAGAAGA ACTGGTGTTC GTGCGCGGTA CGACGGAGGG CATTAACCTT
GTCGCCAACA GTTGGGGAAC GGAAAATATT CGCGCCGGGG ATAACATTAT CATCAGCGAG
ATGGAGCATC ACGCCAACAT CGTTCCCTGG CAGATGCTGT GCGAGCGCAA AGGCGCTGAA
CTGCGCGTGA TCCCATTGCA TCCTGACGGT ACGCTGCGGC TGGAGACCTT AGCTGCGCTG
TTCGATGACC GGACCCGACT GCTGGCCATT ACCCATGTTT CCAATGTGCT GGGGACGGAA
AACCCACTGC CGGACATGAT TGCGCTGGCG CGCCAGCATG GGGCGAAAGT GCTGGTGGAT
GGCGCCCAGG CCGTGATGCA CCATGCTGTT GACGTCCAGG CGCTGGACTG CGATTTTTAC
GTTTTCTCCG GCCATAAACT TTACGGGCCG ACCGGCATCG GCATTCTGTA TGTTAAAGAG
GCGTTGCTGC AAGAAATGCC GCCGTGGGAA GGGGGCGGGT CGATGATCTC GACCGTCAGC
CTGACGCAGG GAACGACATG GGCGAAAGCG CCCTGGCGTT TTGAGGCGGG AACGCCGAAT
ACTGGCGGCA TCATCGGTCT CGGCGCGGCG ATTGATTATG TGACGTCGCT GGGACTGGAT
AAGATTGGCG ATTATGAGCA GATGCTGATG CGCTATGCGC TGGAGCAACT GGCGCAGGTG
CCTGATATCA CGCTATATGG CCCGGCGCAG CGGTTGGGCG TCATCGCGTT TAATCTGGGT
AAACACCACG CTTACGACGT CGGCAGCTTT CTTGATAATT ACGGTATCGC GGTACGAACA
GGGCATCACT GCGCAATGCC GCTCATGGCC TGGTATGGCG TGCCGGCAAT GTGCCGGGCT
TCGCTGGCGA TGTATAACAC CCATGAAGAA GTGGACCGAC TGGTGGCAGG ATTAACGCGT
ATCCACCGCT TATTGGGATA A
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| Protein sequence | MTFPVEKVRA DFPILQREVN GLPLAYLDSA ASAQKPNQVI DAESAFYRHG YAAVHRGIHT
LSAQATESME NVRKQASRFI NARSAEELVF VRGTTEGINL VANSWGTENI RAGDNIIISE
MEHHANIVPW QMLCERKGAE LRVIPLHPDG TLRLETLAAL FDDRTRLLAI THVSNVLGTE
NPLPDMIALA RQHGAKVLVD GAQAVMHHAV DVQALDCDFY VFSGHKLYGP TGIGILYVKE
ALLQEMPPWE GGGSMISTVS LTQGTTWAKA PWRFEAGTPN TGGIIGLGAA IDYVTSLGLD
KIGDYEQMLM RYALEQLAQV PDITLYGPAQ RLGVIAFNLG KHHAYDVGSF LDNYGIAVRT
GHHCAMPLMA WYGVPAMCRA SLAMYNTHEE VDRLVAGLTR IHRLLG
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