Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1477 |
Symbol | |
ID | 6483481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1445919 |
End bp | 1448975 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736867 |
Product | FAD linked oxidase domain protein |
Protein accession | YP_002040621 |
Protein GI | 194444383 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.000065688 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCCAC AAATTTCTCA GGCACCCGGC GTCGTTCAGC TGGTGCTCAA TTTTTTGCAG GCGCTGGAGC AGCAAGGGTT TACGGGCGAT ACGGCAACCA GCTATGCCGA CCGTCTGACA ATGTCGACCG ATAACAGTAT CTACCAGCTT CTTCCCGATG CTGTTGTGTT TCCCCGTTCT ACGGCGGATG TCGCGCTTCT TGCCCGTCTG GCGGCGGAGC CGCGCTTTAC GTCGCTGATA TTTACCCCTC GAGGCGGCGG TACTGGCACG AATGGCCAGG CGCTAAACCA GGGCATTATT GTTGATATGT CCCGCTATAT GAACCGCATT ATTGAAATTA ATCCTGAAGA GAGATGGGTG CGGGTAGAGG CGGGGGTGAT AAAAGATCAG CTTAATCAGG CGTTAAAGCC GTATGGCTAT TTTTTTGCGC CGGAACTTTC CACCAGTAAT CGCGCCACGC TTGGCGGTAT GATTAATACC GATGCCTCTG GTCAGGGTTC GCTGGTCTAT GGGAAAACGT CAGATCACGT CTTAGGCATA CGGGCCGTAT TGTTGGGGGG CGATATCCTT GACACGCAAT CGATGCCCGT AGAGCTTGCC CGGACGCTGG GTGAAAACAC GACGATGCCA GGCCGCATCT ATCAGACCGT CTATCAGTCC TGCCTGGAAA ACCGTCAACT TATCCTCGAT AGCTTTCCAA AGCTCAATCG TTTCCTGACA GGCTACGATT TACGCCACGT CTTTAACGAT GACATGACCC GCTTCGATCT TACCCGCATC TTAACGGGGT CGGAAGGGAC GCTGGCGTTT ATTACTGAAG CCCGGCTGGA TATTACCCCG ATACCCAAAG TCCGCCGTCT GGTGAATGTA AAATACGACT CCTTTGATTC CGCGCTGCGT AACGCCCCTT TTATGGTTGA TGCGCGCGCC TTATCCGTCG AGACGGTCGA TTCCAAAGTC CTTAACCTCG CGCGGGAAGA TATTGTCTGG CACTCCGTTA GCGAATTGAT TACCGATGTG CCGGATAAAG AAATGCTTGG CCTGAATATC GTGGAATTCG CGGGTGACGA TGAAGCGCTT ATTGACGGAC AGGTCGAGGC GCTGTGCCAC CGGCTGGATG GTCTGATGGC GCGAGCGGAA GCGGGCGTGA TCGGCTGGCA ACTTTGTACC GATTTGACGG GTATTGAGCG TATTTACGCG ATGCGCAAAA AAGCGGTAGG GCTGCTGGGT AATGCGAAAG GTGCTGCCAA ACCGATTCCT TTTGCGGAAG ATACCTGCGT GCCGCCTGAA CATCTGGCCG ATTACATCGC CGAATTTCGC GCCCTGCTGG ATGGTCATGG CTTAAGTTAC GGCATGTTCG GCCACGTGGA TGCCGGGGTG CTGCATGTGC GTCCGGCGCT GGATATGTGC GATCCGCAGC AGGAACTGTT GATGAAACAG ATCTCCGATG AGGTCGTCGC GCTGACCGCC AGATACGGCG GGCTGTTGTG GGGCGAGCAT GGAAAAGGTT TTCGTGCGGA ATACAGCCCG GCCTTTTTCG GCGAAGTCCT GTATGGCGAG CTGCGCAAAA TAAAAGCGGC TTTTGATCCG CATAATCGAC TTAACCCGGG TAAAATCTGT CCACCGCAGG GGATAGAGGC GCCGATGATG AAGGTGGATG CGGTAAAACG CGGCACCTGG GATCGGCAAA TCCCGCTGGC GGTACGGCAG ACCTGGCGCG GCGCTATGGA GTGTAATGGT AACGGCCTGT GCTTTAATTT CGATGCGAAA AGCCCAATGT GCCCGTCGAT GAAAATTAGC CTTAACCGGA TCCACTCGCC GAAAGGGCGG GCGACGTTGG TGCGGGAATG GCTCCGTCTA TTGGCCGATC GCGGCGTCGA TCCGTTGAAG CTGGAAAAGG AGTTGCCAGA AAAACGCGCC AGCTTACGCA CGCTGATTGC CCGCACCCGG AATAGTTGGC ACAAACGCAA AGGCGAGTAT GACTTTTCCC ATGAAGTTAA AGAGGCCATG TCCGGCTGTC TGGCGTGTAA AGCCTGTACG ACCCAGTGCC CGATTAAAAT CGATGTTCCG GAGTTTCGTT CACGTTTCTT ACAGCTTTAC CATACGCGTT ATCTGCGTCC GGTACGCGAT CATCTGGTGG CGACGGTCGA GACCTACGCG CCGCTGATGG CGCGTGCGCC AAAGACCTTT AACTTTTTTA TTAACCAACC GGTGGTTCGT AATCTGGCGA AAAAACATAT CGGTATGGTG GATTTACCTC TGCTTTCTGC CCCTTCATTG CAACAGCAAC TGGTGGGCCA TCCGTCCGCT AATATGACGC TTGAGCAACT GGAGCGCATG AGCGCCGAGC AAAAAGCGAA AACGGTACTG GTGGTTCAGG ACCCGTTTAC CAGCTACTAC GACGCTCGGG TCGTAGCGGA CTTTATCCGC CTGGCGGAAA AACTGGGCAG GAGGCCGGTA TTGTTACCGT TCTCGCCGAA TGGTAAGGCG CAGCATATTA AAGGTTTTCT TAATCGCTTT GCGAAAACGG CGAAAAAAAC CTCTGAGTTC CTTAATCGGA TCGCCGCGTT GGGGATGCCG ATGGTGGGTG TCGATCCGGC ACTGGTTCTG TGTTATCGCG ACGAATACAA ACTGGCGCTG GGCGAACAGC GCGGCGATTT TCATGTGTTG CTGGTGAATG AATGGTTGGC GCAGGAAATA AATGCAAGAC TGTCCGTCGA GGTGAGCGGC GAACCGTGGT ACTTTTTTGG TCATTGTACG GAAGTCACGG CTTTACCCGG CGCGCCTGCG CAGTGGGCCG CCATCTTTGC CCATTTTGGC GCGAAGCTGG AAAATGTCAG CGTAGGCTGC TGCGGTATGG CGGGCACTTA TGGACATGAA CTCACCAATC ATAAAAATTC GCTGGGAATT TATGAGCTAT CCTGGCATCA GGCGATGCAA CGTCTACCGC GAAACCGTTG CCTGGCAACC GGCTATTCCT GCCGAAGCCA GGTTAAACGC ATTGAAGGTA CGGGCGTGCG TCACCCGTTG CAGGCATTAC TGGAGATTAT AGGTTGA
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Protein sequence | MIPQISQAPG VVQLVLNFLQ ALEQQGFTGD TATSYADRLT MSTDNSIYQL LPDAVVFPRS TADVALLARL AAEPRFTSLI FTPRGGGTGT NGQALNQGII VDMSRYMNRI IEINPEERWV RVEAGVIKDQ LNQALKPYGY FFAPELSTSN RATLGGMINT DASGQGSLVY GKTSDHVLGI RAVLLGGDIL DTQSMPVELA RTLGENTTMP GRIYQTVYQS CLENRQLILD SFPKLNRFLT GYDLRHVFND DMTRFDLTRI LTGSEGTLAF ITEARLDITP IPKVRRLVNV KYDSFDSALR NAPFMVDARA LSVETVDSKV LNLAREDIVW HSVSELITDV PDKEMLGLNI VEFAGDDEAL IDGQVEALCH RLDGLMARAE AGVIGWQLCT DLTGIERIYA MRKKAVGLLG NAKGAAKPIP FAEDTCVPPE HLADYIAEFR ALLDGHGLSY GMFGHVDAGV LHVRPALDMC DPQQELLMKQ ISDEVVALTA RYGGLLWGEH GKGFRAEYSP AFFGEVLYGE LRKIKAAFDP HNRLNPGKIC PPQGIEAPMM KVDAVKRGTW DRQIPLAVRQ TWRGAMECNG NGLCFNFDAK SPMCPSMKIS LNRIHSPKGR ATLVREWLRL LADRGVDPLK LEKELPEKRA SLRTLIARTR NSWHKRKGEY DFSHEVKEAM SGCLACKACT TQCPIKIDVP EFRSRFLQLY HTRYLRPVRD HLVATVETYA PLMARAPKTF NFFINQPVVR NLAKKHIGMV DLPLLSAPSL QQQLVGHPSA NMTLEQLERM SAEQKAKTVL VVQDPFTSYY DARVVADFIR LAEKLGRRPV LLPFSPNGKA QHIKGFLNRF AKTAKKTSEF LNRIAALGMP MVGVDPALVL CYRDEYKLAL GEQRGDFHVL LVNEWLAQEI NARLSVEVSG EPWYFFGHCT EVTALPGAPA QWAAIFAHFG AKLENVSVGC CGMAGTYGHE LTNHKNSLGI YELSWHQAMQ RLPRNRCLAT GYSCRSQVKR IEGTGVRHPL QALLEIIG
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