| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1473 |
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| Symbol | |
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| ID | 6485650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1442370 |
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| End bp | 1443578 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642736864 |
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| Product | inner membrane transport protein YdiM |
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| Protein accession | YP_002040618 |
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| Protein GI | 194444927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00179045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAATC GTTATTTCCC TACCGCTGTA GGGTTGTATT TTAATTACTT TGTACATGGC
ATGGGGGTTA TCCTGATGAG CCTGAACATG CCATCGCTTG AACAGCAATG GCATACCAGT
GCCGCAGGCG TATCTATTGT GATCTCTTCG CTTGGTATTG GCCGGCTAAG CGTTTTGTTA
ATCGCCGGTA TGCTTTCCGA TCGCTTTGGT CGCCGTCCTT TTATCATTCT GGGGACCACC
TGTTACCTGA TTTTTTTCAT TGGCATTCTT TATGCTCAGA CGATTTTTGT CGCTTATGCC
TGTGGCTTTT TAGCGGGTAT GGCCAACAGT TTTTTAGATG CAGGTACCTA TCCCAGTTTG
ATGGAAGCCT TCCCTCGCTC CCCCAGTACG GCAAATATTC TGATCAAAGC ATTTGTCTCT
GGCGGGCAAT TCTTGTTGCC CATTATTATC AGTTTATTAG TCTGGGCTAA TATGTGGTTT
GGCTGGTCCT TCCTGCTTGC CGGGGCGATC ATGCTTATTA ATGCTCTGTT TTTATTACGC
TGCCCTTTTC CACCCTATCC AGGTCGGATA TTGAAACCCA AAATCTCGCA AGCGCCTGTC
GCAGGCGTAC ATCATTGCTC CCTCATCGAT CTGATCAGCT ACACCCTTTA TGGCTATATC
TCGATGGCAA CCTTTTACCT TATCAGCCAG TGGCTGGCGC AGTATGGACA GTTCGTCGCA
GGAATGTCGT ATACCCAATC CATCAAACTG TTAAGTATTT ATACCTGCGG CTCGCTACTC
TGCGTTTTTA TAACCGCCCC GCTGGTCAGA AAAACAATTC GCTCTACCAC ATTATTGATG
TTTTATACCT TTATCTCTTT TATTGCGCTT CTGACGGTCT GCCTGCATCC TCAGGCCTAT
GTTGTTATGA TCTTCGCATT CGTCATTGGA TTCTCTTCCG CCGGTGGCGT AGTACAAATC
GGCCTGACGC TGATGGCGGC CCGTTTTCCA CAGGAGAAAG GTAAAGCGAC CGGCATTTAT
TACAGCGCCG GCAGTATCGC GACGTTCACT ATTCCGTTGA TCACAGCGCG GATTTCAGAA
ATGAGCATTG CACATATTAT GTGGTTTGAT ACCGGTATCG CCGCAGTGGG ATTTCTCCTC
GCACTGTTCA TCGGTTACCG AAGTCGGGCT GAATCACAAC ATCACGCTGA AGCAGCGTCA
ACTGCGTAA
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| Protein sequence | MKNRYFPTAV GLYFNYFVHG MGVILMSLNM PSLEQQWHTS AAGVSIVISS LGIGRLSVLL
IAGMLSDRFG RRPFIILGTT CYLIFFIGIL YAQTIFVAYA CGFLAGMANS FLDAGTYPSL
MEAFPRSPST ANILIKAFVS GGQFLLPIII SLLVWANMWF GWSFLLAGAI MLINALFLLR
CPFPPYPGRI LKPKISQAPV AGVHHCSLID LISYTLYGYI SMATFYLISQ WLAQYGQFVA
GMSYTQSIKL LSIYTCGSLL CVFITAPLVR KTIRSTTLLM FYTFISFIAL LTVCLHPQAY
VVMIFAFVIG FSSAGGVVQI GLTLMAARFP QEKGKATGIY YSAGSIATFT IPLITARISE
MSIAHIMWFD TGIAAVGFLL ALFIGYRSRA ESQHHAEAAS TA
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