| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1472 |
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| Symbol | |
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| ID | 6485098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1440768 |
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| End bp | 1442003 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642736863 |
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| Product | major facilitator family protein |
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| Protein accession | YP_002040617 |
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| Protein GI | 194445599 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.00286209 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCAGA ACAAGGCTCG CAACATGCCA TATTTGCTGG CTGTTATCTG CATTTATTTT
AGTTACTTTC TCCACGGCAT GAGTGTTATT ACACTAGCCC AGAACATGAC CTCCCTTGCA
CAGAAATTCT CCACGGATAG TGCCGGTATC GCCTATTTAA TCTCTGGCAT TGGTCTTGGC
CGTCTGGTCA GTATTTTATT CTTTGGCGTA CTGTCCGATA AATTTGGCCG TCGGGCAATA
ATACTGCTTG GCGCCGTACT ATATATGCTG TTTTTCTTCG GTATTCCCGC CAGTCCTAAT
CTGATGATCG CTTTCATATT AGCGGTGTGT GTCGGCGTGG CGAACTCCGC GCTGGATACC
GGCGGATACC CTGCATTAAT GGAGTGTTTT CCCAAAGCAT CGGGCTCGGC AGTTATTCTG
GTTAAAGCGA TGGTCTCTTT TGGGCAAATG ATTTATCCCC TTATTGTCAG CGCCTTGTTA
GTCAACCATA TCTGGTACGG CTACGCGGTG GTAATCCCCG GTATCCTTTT CGTCCTCATC
ACGTTGATGC TGTTGAAAAG CCGTTTTCCC AGCCAACTTG TCGATGCCAG TATTGCGAAA
GAATTACCCC AGATGAACAG TTCTCCCCTC GTCTGGCTGG AAGGCGTAGC TTCCGTTTTA
TTTGGCGTCG CCGCGTTCTC AACCTTCTAT GTGATTGTGG TCTGGATGCC TAAATATGCG
ATGGCCTTCG CCGGAATGGC GGAATCCGAC GCGCTGAAAA CCATCTCTTA TTACAGTATG
GGATCGTTGG TTTGCGTGTT TATTTTTGCC GCATTGCTGA AAAAAATGGT TCGCCCTATC
TGGGCCAATG TTTTCAATGC CGGGCTGGCG ACACTCACCG CTGCGGCAAT TTACCTGTAT
CCCTCTCCAC TGATCTGTAA TGCTGGCGCC TTCGTGATTG GTTTTTCCGC TGCTGGAGGT
ATTTTACAAT TAGGTGTATC GGTAATGTCG GAATTTTTCC CTAAGAGTAA AGCTAAAGTC
ACCAGTATAT ATATGATGAT GGGGGGCGTA GCTAACTTTA TTATTCCACT GATCACCGGT
TATCTCTCTA CTATTGGCCT GCAATATATC ATTTTGTTAG ATTTTGCCTT TGCACTACTG
ACATTTATCA CCGCCATTAT TGTATTTATT CGCTATTATC GCGTATTTAA GATCCCGCAA
AACGATGTCC GATTTGGCGA GCGTTATTTC CAGTAA
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| Protein sequence | MSQNKARNMP YLLAVICIYF SYFLHGMSVI TLAQNMTSLA QKFSTDSAGI AYLISGIGLG
RLVSILFFGV LSDKFGRRAI ILLGAVLYML FFFGIPASPN LMIAFILAVC VGVANSALDT
GGYPALMECF PKASGSAVIL VKAMVSFGQM IYPLIVSALL VNHIWYGYAV VIPGILFVLI
TLMLLKSRFP SQLVDASIAK ELPQMNSSPL VWLEGVASVL FGVAAFSTFY VIVVWMPKYA
MAFAGMAESD ALKTISYYSM GSLVCVFIFA ALLKKMVRPI WANVFNAGLA TLTAAAIYLY
PSPLICNAGA FVIGFSAAGG ILQLGVSVMS EFFPKSKAKV TSIYMMMGGV ANFIIPLITG
YLSTIGLQYI ILLDFAFALL TFITAIIVFI RYYRVFKIPQ NDVRFGERYF Q
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