Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1469 |
Symbol | |
ID | 6486014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1437283 |
End bp | 1438878 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642736860 |
Product | propionate CoA-transferase |
Protein accession | YP_002040614 |
Protein GI | 194442461 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.442461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.0256592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA ATAAGCCATC ACGCATTAAT GGCCGCGTTC CCGTGCTCTC TGCACAAGAA GCAGTAAATT ATATTCCAGA TGAGGCCACT TTATGTATTC TGGGCGCAGG CGGCGGTATT CTCGAAGCGA CAACATTAAT TACCGCACTG GCAGATAAAT ATCAAACAAC CCAGTCACCA CGAGATTTAT CTATTATTAG CCCTACCGGA TTAGGTGACC GCGCCGATCG CGGCATCAGC CCGCTGGCGC AGGAGGGGCT GGTAAAATGG GCGCTATGCG GACATTGGGG GCAATCTCCC CGTATTTCTG AACTGGCTGA ACAAAATAAA ATCGCCGCCT ATAACTACCC ACAAGGCGTA TTAACCCAGA CGCTGCGCGC CAGCGCCGCA CACCAGCCGG GTATTCTGAG CGATATTGGT ATTGGTACCT TTGTCGACCC TCGCCAACAG GGCGGAAAAT TAAACGACGT GACTAAAGAA GATCTCATTA AGCTGGTAGA GATCGATAAT AAAGAATATC TCTATTATAA AGCGATAGCG CCTAATGTGG CTTTTATCCG CGCCACCACC TGCGACAGCG AAGGCTATGC ATCATTTGAA GATGAGGTGA TGTATCTTGA TGCGCTGGTG ATCGCCCAGG CCGTTCACAA TAATGGCGGT ATTGTAATGA TGCAGGTGCA GAAAATGGTA AAAAAAGCCA CGCTGCATCC AAAATCCGTG CGTATTCCCG GCTATCTGGT GGATATTGTG GTTGTCGACG CCGACCAGAC GCAACTCTAT GGCGGCGCGC CGGTGAACCG ATTTATCTCC GGGGATTTTA CTCTTGATGA CAGTACCCAG CTTACCCTGC CCCTTAATCA GCGCAAGCTG GTAGCCCGAC GCGCGCTGTT TGAAATGCGT AAAGGCGCGG TAGGCAATGT GGGCGTAGGC ATTGCCGACG GTATTGGTCT GGTCGCTCGC GAGGAAGGCT GCGCCGATGA CTTCGTGCTG ACCGTGGAAA CAGGCCCGGT GGGCGGTATT ACCTCTCAGG GCGTGGCCTT CGGTGCCAAT GTCAATACCC GCGCGATCCT TGATATGACC TCACAATTTG ATTTTTATCA CGGCGGTGGG CTCGATGTCT GCTATTTAAG TTTTGCCGAA GTGGATCAAC ACGGTAATGT CGGTGTACAT AAATTCAACG GCAAAATTAT GGGCACCGGC GGGTTTATCG ATATTAGCGC AACGTCGCAA AAAATTATTT TCTGCGGAAC TCTGACGGCC GGAAGTTTAA AAACTGAAAT TACCGATGGC AAATTAAATA TTCTGCAGGA AGGTCGCGTG AAAAAATTCG TCAGCGAACT GCCGGAAATT ACGTTCAGTG GAAAAATTGC GCTTGAGCGC GGGTTAGACG TGCGTTACAT CACTGAACGT GCGGTTTTCA CTCTCAAACA AGATGGCCTG CATTTAATTG AAATTGCGCC TGGCGTCGAT CTGCAACGGG ATATTCTTGA CAAGATGGAT TTTTCACCGG TTATCTCACC AGATTTAAAA CTGATGGACA CAAGATTATT TACCGATAGC ACTATGGGAT TCACGCTTCC TGACGCAACA CATTAA
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Protein sequence | MKINKPSRIN GRVPVLSAQE AVNYIPDEAT LCILGAGGGI LEATTLITAL ADKYQTTQSP RDLSIISPTG LGDRADRGIS PLAQEGLVKW ALCGHWGQSP RISELAEQNK IAAYNYPQGV LTQTLRASAA HQPGILSDIG IGTFVDPRQQ GGKLNDVTKE DLIKLVEIDN KEYLYYKAIA PNVAFIRATT CDSEGYASFE DEVMYLDALV IAQAVHNNGG IVMMQVQKMV KKATLHPKSV RIPGYLVDIV VVDADQTQLY GGAPVNRFIS GDFTLDDSTQ LTLPLNQRKL VARRALFEMR KGAVGNVGVG IADGIGLVAR EEGCADDFVL TVETGPVGGI TSQGVAFGAN VNTRAILDMT SQFDFYHGGG LDVCYLSFAE VDQHGNVGVH KFNGKIMGTG GFIDISATSQ KIIFCGTLTA GSLKTEITDG KLNILQEGRV KKFVSELPEI TFSGKIALER GLDVRYITER AVFTLKQDGL HLIEIAPGVD LQRDILDKMD FSPVISPDLK LMDTRLFTDS TMGFTLPDAT H
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