Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1467 |
Symbol | |
ID | 6484578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1435152 |
End bp | 1436042 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642736858 |
Product | AraC family transcriptional regulator |
Protein accession | YP_002040612 |
Protein GI | 194446454 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.145729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAGC GCTGTTTTGA CTCCGCCGCG GAGACGATTT TTGAACAGGA CAAGACCCCT CGATTTTCAC GTTTTGTCAT TAGCGATGAT CCAAACTGGG AGTCTGGCCA TCATATGCAT GATAATGAAA CAGAGCTTAT TTACGTCAAA AAAGGGATAG CCAGGTTAAT TATTGACTCT TCACTCTACG TCGCGCATGC GGACGATATT GTCGTCGTTG AGCGGGGGCG GCTACACGCT GTAGCATCCG ACAGCAATTC GCCGGCTACC ACCTATACCT GTGCGCTGTA TGGGTTTTGT TTTCCAGGTT GGGAAGAAAA CCAACTATTG CAGAGTCATT CCTGTCCGGT GGTTTCCGTG GTTCAGGGGA AAGAGGTCAT TAAAAGTATC TTTAATGAAT TAAGCGTGTT ACTTCCGCAG GGGAAAAACG TATTGGCTTC CTCTGTATAC GATGCATTTG CTTACACTCT GACCGCGCTT TATTATGAAA ATTTTAAAAA TGCCTATCGT TCTGAACAAG GCTACATTAA AAAAGATGTA TTAATTAAGG ATGTACTTGT TTATCTCAAT AATAATTATC GTGAAAAAAT CACGCTTGAC CAGCTATCGA AAAAATTTCG CGCCAGCGTC AGTTATATAT GCCATGAATT TGCCAAGGAA TATCATATAT CTCCTATCAA CTATGTTATT CAACGACGTA TGACCGAGGC CAAGTTTGCG CTGACAAACA CTGAGTCGCC ACTGGCAGAA ATTTCATGGC GGGTAGGATA TGAAAATGTG GACCATTTTG CCAAATTGTT TATGCGGCAT GTAGGATGTT CTCCCAACGA TTATCGTAAG CAATTTAAAA ATAGTCTGGT TGAGCAGGCG TATTTGCTGC CAAATACCTG A
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Protein sequence | MYQRCFDSAA ETIFEQDKTP RFSRFVISDD PNWESGHHMH DNETELIYVK KGIARLIIDS SLYVAHADDI VVVERGRLHA VASDSNSPAT TYTCALYGFC FPGWEENQLL QSHSCPVVSV VQGKEVIKSI FNELSVLLPQ GKNVLASSVY DAFAYTLTAL YYENFKNAYR SEQGYIKKDV LIKDVLVYLN NNYREKITLD QLSKKFRASV SYICHEFAKE YHISPINYVI QRRMTEAKFA LTNTESPLAE ISWRVGYENV DHFAKLFMRH VGCSPNDYRK QFKNSLVEQA YLLPNT
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