Gene SNSL254_A1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1467 
Symbol 
ID6484578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1435152 
End bp1436042 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID642736858 
ProductAraC family transcriptional regulator 
Protein accessionYP_002040612 
Protein GI194446454 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.145729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGC GCTGTTTTGA CTCCGCCGCG GAGACGATTT TTGAACAGGA CAAGACCCCT 
CGATTTTCAC GTTTTGTCAT TAGCGATGAT CCAAACTGGG AGTCTGGCCA TCATATGCAT
GATAATGAAA CAGAGCTTAT TTACGTCAAA AAAGGGATAG CCAGGTTAAT TATTGACTCT
TCACTCTACG TCGCGCATGC GGACGATATT GTCGTCGTTG AGCGGGGGCG GCTACACGCT
GTAGCATCCG ACAGCAATTC GCCGGCTACC ACCTATACCT GTGCGCTGTA TGGGTTTTGT
TTTCCAGGTT GGGAAGAAAA CCAACTATTG CAGAGTCATT CCTGTCCGGT GGTTTCCGTG
GTTCAGGGGA AAGAGGTCAT TAAAAGTATC TTTAATGAAT TAAGCGTGTT ACTTCCGCAG
GGGAAAAACG TATTGGCTTC CTCTGTATAC GATGCATTTG CTTACACTCT GACCGCGCTT
TATTATGAAA ATTTTAAAAA TGCCTATCGT TCTGAACAAG GCTACATTAA AAAAGATGTA
TTAATTAAGG ATGTACTTGT TTATCTCAAT AATAATTATC GTGAAAAAAT CACGCTTGAC
CAGCTATCGA AAAAATTTCG CGCCAGCGTC AGTTATATAT GCCATGAATT TGCCAAGGAA
TATCATATAT CTCCTATCAA CTATGTTATT CAACGACGTA TGACCGAGGC CAAGTTTGCG
CTGACAAACA CTGAGTCGCC ACTGGCAGAA ATTTCATGGC GGGTAGGATA TGAAAATGTG
GACCATTTTG CCAAATTGTT TATGCGGCAT GTAGGATGTT CTCCCAACGA TTATCGTAAG
CAATTTAAAA ATAGTCTGGT TGAGCAGGCG TATTTGCTGC CAAATACCTG A
 
Protein sequence
MYQRCFDSAA ETIFEQDKTP RFSRFVISDD PNWESGHHMH DNETELIYVK KGIARLIIDS 
SLYVAHADDI VVVERGRLHA VASDSNSPAT TYTCALYGFC FPGWEENQLL QSHSCPVVSV
VQGKEVIKSI FNELSVLLPQ GKNVLASSVY DAFAYTLTAL YYENFKNAYR SEQGYIKKDV
LIKDVLVYLN NNYREKITLD QLSKKFRASV SYICHEFAKE YHISPINYVI QRRMTEAKFA
LTNTESPLAE ISWRVGYENV DHFAKLFMRH VGCSPNDYRK QFKNSLVEQA YLLPNT