Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1458 |
Symbol | aroH |
ID | 6482189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1424813 |
End bp | 1425859 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736850 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_002040604 |
Protein GI | 194444464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.958349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA CCGATGAACT CCGTACTGCG CGTATCGACA GCCTGGTAAC ACCGACCGAA CTCGCGCAGC GGTATCCTGT ATCGTCCTCC GTCGCCAGTC ACGTTACCGA CTCCCGACGC CGGATAGAAA AGATTTTAAA TGGTGAAGAT CCACGGCTAC TGGTCGTCAT TGGCCCCTGT TCGATTCACG ATCTGAATGC TGCCATGGAA TACGCGACGC AGCTCCAGGC ACAACGCCAA AAGCATCAGG CGCGTCTGGA AATCGTCATG CGCACCTATT TTGAAAAACC GCGCACCGTC GTGGGATGGA AAGGCCTGAT TTCCGATCCC GACTTGAATG GAAGTTACCG CGTCAATTAT GGGCTTGAAC TGGCGCGTCG CTTGCTATTG CAGGTGAACG AACTGGGAGT ACCGACCGCC ACAGAGTTTC TTGATATGGT CACTGGCCCG TTTATTGCCG ATCTGATCAG TTGGGGAGCG ATTGGCGCGC GTACCACCGA AAGCCAAATC CATCGGGAAA TGGCTTCTGC GCTCTCTTGT CCGGTCGGCT TTAAAAATGG TACAGATGGC AATACTCGCA TTGCCGTTGA CGCTATTCGC GCTTCCCGCG CCAGCCATAT GTTTCTCTCG CCGGATAAAG ACGGACAGAT GACCATCTAC CAGACGAGTG GCAACCCGTA TGGGCACATC ATCATGCGCG GCGGTAAAAA ACCGAACTAC CACGCTGAAG ATATTGCCGC CGCCTGCGAT ACGTTGCATG AATTTGATCT GCCGGAACAT CTGGTCGTCG ACTTCAGCCA CGGCAACTGT CAAAAACAGC ATCGCCGCCA GTTGGACGTA TGTGATGATA TTTGCCAGCA GATTCGTAAT GGCTCCACGG CAATTGCCGG GATTATGGCA GAGAGTTTTT TACGGGAAGG CACGCAAAAA ATTATCAGCG GTCAACCGTT AATCTATGGT CAATCCATTA CCGATCCCTG CCTGAACTGG GAAGATACGG AAGTTCTGTT GGAAAAACTT GCCGCGGCGG TAGACAGCCG CTTTTAA
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Protein sequence | MNRTDELRTA RIDSLVTPTE LAQRYPVSSS VASHVTDSRR RIEKILNGED PRLLVVIGPC SIHDLNAAME YATQLQAQRQ KHQARLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNY GLELARRLLL QVNELGVPTA TEFLDMVTGP FIADLISWGA IGARTTESQI HREMASALSC PVGFKNGTDG NTRIAVDAIR ASRASHMFLS PDKDGQMTIY QTSGNPYGHI IMRGGKKPNY HAEDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLDV CDDICQQIRN GSTAIAGIMA ESFLREGTQK IISGQPLIYG QSITDPCLNW EDTEVLLEKL AAAVDSRF
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