Gene SNSL254_A1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1428 
Symbol 
ID6486312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1395589 
End bp1395936 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content49% 
IMG OID642736820 
ProductPTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 
Protein accessionYP_002040574 
Protein GI194444735 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID[TIGR00823] phosphotransferase system enzyme II, lactose-specific, factor III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.33758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC TTGAAAATGT TGTAGATAAC CAGACAGCGG CTGAGGAACT CGAAGAAGTC 
GTTATGGGGC TTATCATCAA TTCTGGTCAG GCGCGCAGCC TGGCATATGG CGCGCTCAGA
AAAGCGAAAG AAGGCGATTT TGAGGCGGCG AAAGCGATGA TGGACCAGTC GCGCATAGCG
CTCAATGAAG CGCATCTTGT GCAGACAAAA CTCATCGAAG GCGATCAGGG CGAAGGTAAA
ATGAAAGTCA GTCTGGTCCT GGTTCACGCT CAGGATCATT TGATGACATC AATGCTGGCT
CGTGAACTGA TCGCTGAGTT GATTGAGCTC CATGAGAAAC TGAAATAA
 
Protein sequence
MFDLENVVDN QTAAEELEEV VMGLIINSGQ ARSLAYGALR KAKEGDFEAA KAMMDQSRIA 
LNEAHLVQTK LIEGDQGEGK MKVSLVLVHA QDHLMTSMLA RELIAELIEL HEKLK