| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1427 |
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| Symbol | chbC |
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| ID | 6485817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1394180 |
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| End bp | 1395538 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642736819 |
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| Product | PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC |
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| Protein accession | YP_002040573 |
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| Protein GI | 194446245 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.428261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACG TTATTGCTTC ACTTGAAAAG GTACTCCTTC CTTTTGCTGT AAAAATAGGA
AAGCAGCCAC ACGTTAATGC AATCAAGAAC GGCTTTATTC GTTTAATGCC ATTAACCCTT
GCGGGGGCGA TGTTTGTATT AATTAATAAC GTTTTCCTGA GCTTTGGGGA GGGGGCGTTT
TTTTATTCCA TGGGCATTCG GCTTGATGCC TCAACCATTG AAACTCTTAA TGGATTGAAA
GGTATCGGCG GGAACGTCTA TAACGGCACA TTGGGCATTA TGTCGCTCAT GGCGCCATTT
TTTATCGGCA TGGCGCTGGC GGAAGAGCGT AAGGTTGATG CGCTGGCCGC CGGACTGCTC
TCCGTGGCGG CATTTATGAC CGTAACGCCG TATAGTGTCG GCGAGGCCTA TGCCGTAGGC
GCTAACTGGC TGGGCGGCGC GAATATTATC TCCGGTATTA TTATTGGCCT GGTGGTCGCG
GAGATGTTTA CATTTGTTGT CCGGCGTAAC TGGGTGATTA AGCTACCGGA CAGCGTACCG
GCTTCGGTGT CTCGTTCATT CTCAGCATTA ATTCCCGGCT TTATTATTCT CTCTATTATG
GGGATTATTG CCTGGGCGCT GTCTAATTAC GGTTCTAACT TCCATCAGAT TATTATGGAC
ACTATCTCTA CGCCGCTGGC ATCGCTGGGT AGCGTGGTAG GGTGGGCATA TGTCATTTTT
GTACCGCTGC TGTGGTTCTT TGGTATTCAT GGTTCGCTGG CGCTGACCGC GCTGGACAGC
GGCATCATGA CGCCCTGGGC GCTGGAAAAC ATCTCTATTT ACCAACAGTA TGGCTCCGTC
GATGCGGCGC TGGAAGCCGG TAAAACGTTC CATATCTGGG CGAAACCGAT GCTGGATTCT
TATATCTTCC TCGGTGGTAG CGGCGCAACG CTGGGTCTGA TCATCGCTAT CTTCCTGGCA
TCCCGTCGCG CGGACTATCG CCAGGTGGCA AAACTGGCGC TGCCGTCAGG TATCTTCCAG
ATTAACGAAC CCATCCTGTT TGGCCTGCCG ATTATTATGA ACCCGGTGAT GTTTATCCCC
TTCATTCTGG TTCAGCCGAT TCTGGCGGCG ATTACGCTGG TGGCTTACTA TTTGGGTATT
ATTCCACCGA TTACCAATAT TGCGCCGTGG ACCATGCCAA CCGGGTTGGG GGCGTTCTTT
AACACCAACG GCAGTGTCGC CGCGTTGCTG GTTGCGCTAT TTAACCTGGC GGTCGCTACC
CTGATTTATC TCCCCTTCGT GGTGGTGGCT AACAAAGCGC AGAACGCCAT CGAGCAGGAA
GAAAGCGAAG AAGATATCGC TAACGCACTG AAATTCTAA
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| Protein sequence | MSNVIASLEK VLLPFAVKIG KQPHVNAIKN GFIRLMPLTL AGAMFVLINN VFLSFGEGAF
FYSMGIRLDA STIETLNGLK GIGGNVYNGT LGIMSLMAPF FIGMALAEER KVDALAAGLL
SVAAFMTVTP YSVGEAYAVG ANWLGGANII SGIIIGLVVA EMFTFVVRRN WVIKLPDSVP
ASVSRSFSAL IPGFIILSIM GIIAWALSNY GSNFHQIIMD TISTPLASLG SVVGWAYVIF
VPLLWFFGIH GSLALTALDS GIMTPWALEN ISIYQQYGSV DAALEAGKTF HIWAKPMLDS
YIFLGGSGAT LGLIIAIFLA SRRADYRQVA KLALPSGIFQ INEPILFGLP IIMNPVMFIP
FILVQPILAA ITLVAYYLGI IPPITNIAPW TMPTGLGAFF NTNGSVAALL VALFNLAVAT
LIYLPFVVVA NKAQNAIEQE ESEEDIANAL KF
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