Gene SNSL254_A1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1419 
SymbolastE 
ID6483801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1389223 
End bp1390191 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID642736811 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_002040565 
Protein GI194444440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.585114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACT TTCTGGCGTT GACGCTAAGC GGCACGACAC CACGGGTGAG GCAGGGGAAG 
AGCGCGGGTT TTCGCTGGCG CTGGTTAGGC CATGGTCTGC TTGAACTCAC GCCCGATGCG
CCGGTCGACC GCGCGTTAAT TCTTTCTGCG GGGATACATG GCAATGAAAC CGCGCCGGTC
GAGATGCTGG ATAAGCTGCT ATCGGCGCTG TATTCAGGCA GCTTGACGTT AACGTGGCGA
GTGCTGGTGG TACTCGGCAA TCCGCAGGCG CTGGCGGCGG GAATACGCTA TTGTCACAGC
GATATGAACC GTATGTTTGG CGGGCGTTGG CAGTCCTTTG CCGAAAGCGA TGAAACGCGG
CGGGCGCGTG AGCTGGAGCT AAGTCTGGAG ACCTTCTTTT CATCTGGCCA GGCGCGGGTA
CGCTGGCATC TGGATCTGCA TACCGCCATT CGTGGCTCGC ATCATTTGCG TTTTGGCGTA
TTGCCGCAGC GCGACCGCCC GTGGGAGGCG GATTTTCTGG CGTGGCTGGG CGCGGCAGGA
CTGGAGGCGT TGGTATTTCA TCAGGCGCCC GGCGGTACGT TTACGCACTT TAGCTCTGAA
CATTTCGGCG CGCTTTCCTG CACCCTGGAG TTGGGAAAGG CGTTGCCGTT TGGGCAAAAC
GATCTGACGC AGTTCAGCGT AACCTCGCAG GCGTTGTCGG CGCTGCTGAG CGGTGTCGAA
ACGTCAACCT CGTCTTCGCC GCCGCTACGC TATCGGGTGG TGTCGCAAAT CACGCGTCAC
AGCGACAAGT TCGCGCTTTA TATGGATGCG CAAACGCTGA ATTTTACTGC CTTTGCGAAG
GGAACGTTGC TGGCCGAGGA GGGGGATAAG CGCGTGACGG TGACGCATGA CGTTGAATAT
GTTCTTTTTC CTAATCCCGC TGTCGCCTGC GGATTGCGGG CTGGATTAAT GCTGGAAAGA
CTGCCCTGA
 
Protein sequence
MDNFLALTLS GTTPRVRQGK SAGFRWRWLG HGLLELTPDA PVDRALILSA GIHGNETAPV 
EMLDKLLSAL YSGSLTLTWR VLVVLGNPQA LAAGIRYCHS DMNRMFGGRW QSFAESDETR
RARELELSLE TFFSSGQARV RWHLDLHTAI RGSHHLRFGV LPQRDRPWEA DFLAWLGAAG
LEALVFHQAP GGTFTHFSSE HFGALSCTLE LGKALPFGQN DLTQFSVTSQ ALSALLSGVE
TSTSSSPPLR YRVVSQITRH SDKFALYMDA QTLNFTAFAK GTLLAEEGDK RVTVTHDVEY
VLFPNPAVAC GLRAGLMLER LP