| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1417 |
|---|
| Symbol | astD |
|---|
| ID | 6484641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1386412 |
|---|
| End bp | 1387890 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642736809 |
|---|
| Product | succinylglutamic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_002040563 |
|---|
| Protein GI | 194445282 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTAT GGATAAACGG CGACTGGATA ACCGGTCAGG GCGAACGCCG CCGCAAAACG
AATCCGGTGA GTGCGGAGAT ACTTTGGCAG GGGAATGACG CTAATGCGGC ACAGGTCGCC
GAGGCCTGTC AGGCGGCGCG CGCGGCGTTT CCTCGTTGGA CCAGAGAGCC TTTTGCCGCA
CGACAGGCTA TCGTAGAGAA ATTTGCCGCC CTGCTGGAGG CGCATAAAGC CGAGCTCACG
GAGGTCATCG CACGTGAAAC CGGTAAACCG CGCTGGGAGG CGGAAACGGA AGTGACGGCG
ATGATCAATA AGATTGCCAT CTCGATTAAG GCTTACCACG CCAGAACAGG CGAACAAAAA
AGCGAACTTG TCGATGGCGC CGCGACGTTG CGCCATCGTC CTCACGGTGT GCTGGCGGTA
TTCGGCCCTT ATAACTTTCC CGGCCATTTA CCGAATGGCC ATATTGTGCC CGCGTTGCTG
GCAGGCAATA CGCTGATCTT CAAACCTAGC GAGCTAACGC CATGGACCGG GGAAACGGTA
ATAAAACTCT GGGAACGGGC GGGGCTACCG GCAGGCGTTC TTAATCTGGT GCAGGGCGGC
CGGGAGACCG GACAAGCGCT AAGTTCGCTC GACGATCTCG ACGGACTGCT GTTTACCGGC
AGCGCCAGTA CCGGATATCA GCTTCATCGC CAGCTATCCG GCCAGCCGGA AAAAATCCTG
GCTCTTGAAA TGGGCGGAAA CAACCCGCTC ATTATTGAGG ATGTGGCAAA TATAGATGCG
GCGGTACATC TGACGCTGCA ATCGGCGTTT ATTACCGCCG GACAGCGCTG TACCTGCGCG
CGACGCCTTC TGGTAAAACA GGGTGCGCAG GGAGATGCAT TTCTGGCGCG GCTGGTTGAC
GTTGCCGGAC GTCTGCAGCC CGGCAGATGG GACGACGATC CGCAGCCGTT TATCGGCGGA
CTGATTTCAG CGCAGGCGGC ACAGCATGTG ATGGAGGCCT GGCGTCAACG AGAGGCATTA
GGCGGGCGCA CGTTACTGGC GCCGCGGAAG GTCAAAGAGG GAACCTCTCT GCTGACGCCT
GGCATCATTG AGCTGACGGG CGTCGCGGAT GTGCCGGATG AAGAGGTGTT TGGTCCGCTG
CTGAACGTCT GGCGTTATGC GCATTTCGAT GAGGCGATTC GTCTGGCGAA TAATACCCGT
TTTGGTCTGT CGTGTGGGCT GGTGTCGACG GATCGCGCGC AGTTCGAACA GCTCTTGCTG
GAGGCGCGGG CTGGGATCGT TAACTGGAAT AAACCGCTCA CCGGGGCAGC GAGTACTGCG
CCGTTTGGTG GTGTCGGCGC GTCTGGCAAC CATCGGCCCA GCGCCTGGTA TGCCGCCGAT
TATTGCGCCT GGCCGATGGC TAGTCTGGAG TCTCCCGAAC TGACGTTGCC TGCGACATTA
AGCCCCGGCC TCGACTTTTC TCGCAGGGAG GCGGTATGA
|
|---|
| Protein sequence | MTLWINGDWI TGQGERRRKT NPVSAEILWQ GNDANAAQVA EACQAARAAF PRWTREPFAA
RQAIVEKFAA LLEAHKAELT EVIARETGKP RWEAETEVTA MINKIAISIK AYHARTGEQK
SELVDGAATL RHRPHGVLAV FGPYNFPGHL PNGHIVPALL AGNTLIFKPS ELTPWTGETV
IKLWERAGLP AGVLNLVQGG RETGQALSSL DDLDGLLFTG SASTGYQLHR QLSGQPEKIL
ALEMGGNNPL IIEDVANIDA AVHLTLQSAF ITAGQRCTCA RRLLVKQGAQ GDAFLARLVD
VAGRLQPGRW DDDPQPFIGG LISAQAAQHV MEAWRQREAL GGRTLLAPRK VKEGTSLLTP
GIIELTGVAD VPDEEVFGPL LNVWRYAHFD EAIRLANNTR FGLSCGLVST DRAQFEQLLL
EARAGIVNWN KPLTGAASTA PFGGVGASGN HRPSAWYAAD YCAWPMASLE SPELTLPATL
SPGLDFSRRE AV
|
|---|
| |