| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1415 |
|---|
| Symbol | |
|---|
| ID | 6485890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1384164 |
|---|
| End bp | 1385390 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642736807 |
|---|
| Product | bifunctional succinylornithine transaminase/acetylornithine transaminase |
|---|
| Protein accession | YP_002040561 |
|---|
| Protein GI | 194444888 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTGT CAGTTACGCG CGAAAACTTT GATGAATGGA TGGTGCCGGT ATACGTTCCC
GCGCCTTTTA TTCCTGTACG CGGAGAAGGC TCACGCCTGT GGGATCAGCA GGGGAAAGAG
TATATTGATT TTGCTGGTGG GATCGCGGTC AACGCCTTGG GACATGCGCA TCCGGCGCTG
CGCGAGGCGT TAAATGAACA GGCGAATCGC TTCTGGCATA CCGGGAACGG TTACACCAAT
GAACCGGCGC TGCGACTGGC GAAAAAACTG ATCGACGCGA CCTTCGCCGA ACGCGTTTTC
TTTTGTAATT CAGGCGCTGA AGCAAATGAA GCTGCATTAA AACTGGCGCG CAAATATGCC
CACGATCGTG TCGGCAACCA TAAAAGCGGC ATTGTGGCCT TTAAAAACGC GTTCCATGGC
CGCACGCTCT TTACCGTCAG CGCTGGCGGT CAACCGACCT ATTCACAGGA CTTTGCGCCG
CTGCCGCCGG ATATTCGTCA TGCAGCCTAT AACGATCTGA ACTCCGCCAG CGCGCTAATT
GATGACAATA CCTGCGCCGT GATCGTAGAA CCGGTGCAGG GCGAGGGCGG CGTGATCCCC
GCCACGAAAG CTTTTTTGCA GGGGCTGCGT GAATTGTGCG ACCGGTATCA GGCGTTACTG
ATTTTTGATG AGGTGCAGAC GGGCGTCGGA CGTACCGGCG AACTGTATGC ATATATGCAT
TATGGCGTTA CGCCCGATAT CCTGACGACC GCTAAAGCGC TGGGCGGCGG CTTCCCGATC
GGCGCGATGC TGACCACGCA AAACTATGCC AGCGTCATGA CGCCAGGCAC GCATGGCACC
ACCTACGGCG GTAATCCGCT GGCGACGGCA GTTGCCGGAA AAGTACTGGA TATCATCAAT
ACGCCGGAGA TGCAAAACGG CGTCAGACAG CGCCACGATG CGTTTATTGA ACGTCTAAAT
ACCCTTAATG TACGTTTTGG CATGTTCAGT GAAATTCGCG GGCTGGGGCT ACTGCTTGGC
TGTGTGCTAC AGACGGAGTT TGCCGGAAAA GCCAAACTCA TCGCCCAGGA AGCGGCAAAA
GCAGGCGTGA TGGTGCTCAT TGCCGGTGGC GACGTGGTGC GTTTTGCGCC AGCGTTAAAT
GTGAGCGACG AGGAGATAGC CACCGGGCTT GATCGTTTTG CCCTGGCGTG CGAACGCCTT
CAGACGGGAG GCGCACCATG CGGGTGA
|
|---|
| Protein sequence | MSLSVTRENF DEWMVPVYVP APFIPVRGEG SRLWDQQGKE YIDFAGGIAV NALGHAHPAL
REALNEQANR FWHTGNGYTN EPALRLAKKL IDATFAERVF FCNSGAEANE AALKLARKYA
HDRVGNHKSG IVAFKNAFHG RTLFTVSAGG QPTYSQDFAP LPPDIRHAAY NDLNSASALI
DDNTCAVIVE PVQGEGGVIP ATKAFLQGLR ELCDRYQALL IFDEVQTGVG RTGELYAYMH
YGVTPDILTT AKALGGGFPI GAMLTTQNYA SVMTPGTHGT TYGGNPLATA VAGKVLDIIN
TPEMQNGVRQ RHDAFIERLN TLNVRFGMFS EIRGLGLLLG CVLQTEFAGK AKLIAQEAAK
AGVMVLIAGG DVVRFAPALN VSDEEIATGL DRFALACERL QTGGAPCG
|
|---|
| |