Gene SNSL254_A1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1405 
SymbolansA 
ID6484681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1373768 
End bp1374856 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content52% 
IMG OID642736797 
Productcytoplasmic asparaginase I 
Protein accessionYP_002040551 
Protein GI194444025 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0150726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0252011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGT CTGCTCATAG CCGCCATCCG ATAATCATTA ATACGTCCTT CGCGACACGA 
CTGAACATTA TCATGCAAAA GAAATCAATT TACGTTGCCT ATACCGGCGG TACTATCGGT
ATGCAGCGCT CAGATAAAGG GTATATCCCG GTGTCCGGGC ACCTTCAGCG CCAGCTGGCG
CTGATGCCGG AATTCCACCG CCCGGAGATG CCGGATTTTA CCATCCATGA ATATGCCCCG
CTGATGGATT CATCAGATAT GACGCCGGAA GACTGGCAGC ATATCGCTGC AGATATCAAA
GCGCACTACG ATGAGTATGA CGGTTTTGTT ATTCTGCACG GCACCGACAC GATGGCGTTT
ACCGCATCGG CGCTCTCTTT CATGCTGGAA AATCTGGGTA AACCGGTTAT TGTGACAGGG
TCACAAATTC CGCTGGCTGA GCTGCGCTCC GACGGGCAAA TTAATTTGCT GAATGCGCTT
TATGTCGCCG CCAACTACCC TATTAATGAA GTAACGCTGT TTTTTAATAA TCGTCTGTTC
CGCGGCAATC GCACGACCAA AGCCCATGCG GATGGTTTTG ACGCTTTTGC CTCTCCTAAT
CTGCCGCCCT TGCTGGAAGC AGGAATTCAC ATTCGCCGTT TAAATACGCC TCCCGCGCCC
TACGGTTCTG GTGAATTAAT CGTTCACCCT ATTACGCCGC AGCCGATAGG CGTAGTGACG
ATTTATCCGG GGATTTCCGC CGAGGTAGTA CGTAACTTTC TGCGTCAGCC GGTAAAAGCG
CTGATTCTGC GCTCTTATGG CGTAGGCAAC GCGCCGCAAA ATAAAGCGTT TTTACAGGAG
CTGAAAGAGG CCAGTTCGCG CGGCATCGTG GTGGTTAACC TGACGCAATG CATGTCAGGG
AGAGTCAATA TGGGCGGGTA CGCTACCGGT AATGCGCTGG CGCACGCTGG CGTGATTGGC
GGTGCCGATA TGACCGTCGA AGCTACCTTA ACCAAACTGC ATTATTTGTT AAGCCAGGGT
CTGGACACTC AGGCGATTCG TAGCGCGATG GCGCAAAACT TGCGTGGTGA ATTGACGCCG
GATGATTAA
 
Protein sequence
MAASAHSRHP IIINTSFATR LNIIMQKKSI YVAYTGGTIG MQRSDKGYIP VSGHLQRQLA 
LMPEFHRPEM PDFTIHEYAP LMDSSDMTPE DWQHIAADIK AHYDEYDGFV ILHGTDTMAF
TASALSFMLE NLGKPVIVTG SQIPLAELRS DGQINLLNAL YVAANYPINE VTLFFNNRLF
RGNRTTKAHA DGFDAFASPN LPPLLEAGIH IRRLNTPPAP YGSGELIVHP ITPQPIGVVT
IYPGISAEVV RNFLRQPVKA LILRSYGVGN APQNKAFLQE LKEASSRGIV VVNLTQCMSG
RVNMGGYATG NALAHAGVIG GADMTVEATL TKLHYLLSQG LDTQAIRSAM AQNLRGELTP
DD