Gene SNSL254_A1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1403 
Symbol 
ID6486028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1372455 
End bp1372733 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content50% 
IMG OID642736795 
Productgeneral negative regulator of transcription subunit 1 
Protein accessionYP_002040549 
Protein GI194445331 
COG category[S] Function unknown 
COG ID[COG3139] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0314437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTG ATGAGATCAT TAACAGCATG ACGCCGGAAG TGTATCAACG TTTATCCACC 
GCCGTTGAGC TGGGTAAGTG GCCGGATGGC GTGGCGTTGA CGCCGGAACA GAAAGAAAAC
AGCCTGCAAC TGGTGATGCT ATGGCAGGCG CGGCACAATA CCGAAGCGCA ACATATGACG
ATCGATACTC ACGGTCAGAT GGTGATGAAA AGCAAGCAGC AGCTCAAAGC GGATTTCGGT
ATTACGTCAA AGCCGATTGC GACATTGAAA ATGCAGTAA
 
Protein sequence
MNLDEIINSM TPEVYQRLST AVELGKWPDG VALTPEQKEN SLQLVMLWQA RHNTEAQHMT 
IDTHGQMVMK SKQQLKADFG ITSKPIATLK MQ