| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1401 |
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| Symbol | gapA |
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| ID | 6483973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1370663 |
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| End bp | 1371658 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642736793 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_002040547 |
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| Protein GI | 194446706 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.00482616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTCCGTGCT
GCTCAGAAAC GTTCTGACAT CGAGATCGTT GCAATCAACG ACCTGTTAGA CGCAGAGTAC
ATGGCATACA TGCTGAAATA TGACTCCACT CACGGCCGTT TCGACGGTAC TGTTGAAGTG
AAAGACGGTC ATCTGATCGT TAACGGTAAA AAAATCCGTG TTACCGCTGA ACGCGATCCG
GCTAACCTGA AATGGGACGA AGTTGGTGTT GACGTAGTGG CTGAAGCTAC CGGTATCTTC
CTGACTGACG AAACCGCGCG TAAACACATC ACCGCTGGCG CGAAAAAAGT GGTTCTGACG
GGTCCGTCTA AAGACAACAC CCCAATGTTT GTTAAAGGCG CTAACTTTGA CAAATACGAA
GGCCAGGACA TCGTTTCCAA CGCTTCCTGC ACCACCAACT GCCTGGCGCC GCTGGCTAAA
GTTATCAACG ACAACTTCGG CATCATCGAA GGTCTGATGA CTACTGTTCA CGCGACTACC
GCAACCCAGA AAACCGTTGA CGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCA
TCTCAGAACA TCATCCCGTC CTCTACTGGC GCTGCTAAAG CGGTAGGTAA AGTACTGCCG
GAACTGAATG GCAAACTGAC TGGTATGGCG TTCCGCGTTC CGACTCCGAA CGTATCCGTT
GTTGACCTGA CCGTTCGTCT GGAAAAAGCG GCTACCTACG AGCAGATCAA AGCTGCTGTT
AAAGCTGCTG CCGAAGGCGA AATGAAAGGC GTTCTGGGTT ACACCGAAGA CGACGTTGTA
TCTACCGATT TCAACGGCGA AGTATGCACT TCCGTGTTCG ATGCTAAAGC AGGCATCGCG
CTGAACGACA ACTTCGTGAA ACTGGTCTCC TGGTACGATA ACGAAACCGG TTACTCCAAC
AAAGTACTGG ACCTGATTGC TCACATCTCC AAATAA
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| Protein sequence | MTIKVGINGF GRIGRIVFRA AQKRSDIEIV AINDLLDAEY MAYMLKYDST HGRFDGTVEV
KDGHLIVNGK KIRVTAERDP ANLKWDEVGV DVVAEATGIF LTDETARKHI TAGAKKVVLT
GPSKDNTPMF VKGANFDKYE GQDIVSNASC TTNCLAPLAK VINDNFGIIE GLMTTVHATT
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVLP ELNGKLTGMA FRVPTPNVSV
VDLTVRLEKA ATYEQIKAAV KAAAEGEMKG VLGYTEDDVV STDFNGEVCT SVFDAKAGIA
LNDNFVKLVS WYDNETGYSN KVLDLIAHIS K
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