Gene SNSL254_A1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1387 
Symbol 
ID6482598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1356695 
End bp1357879 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content58% 
IMG OID642736780 
Productinner membrane transport protein YeaN 
Protein accessionYP_002040534 
Protein GI194443300 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00896] cyanate transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000728504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACAG CCCTTTCACC ACGCGGCAAA CAGGGCGCTT TACTGATTGC CGGTATTTTG 
ATGATAGCCA CTACGCTGCG CGTAACATTT ACCGGCGCTG CGCCGTTGCT GGAGACAATC
CGTTCGGATT ACGGTCTTTC CACCGCCCAG ACGGGCCTGC TAACAACCTT GCCGCTTCTG
GCGTTTGCAC TGGTTTCGCC GCTGGCGGCC GGTATTGCCC GCCGGTTTGG GATGGAACGC
AGTCTGTTTG CCGCAATGCT GCTGATTTGC GCGGGTATTG CTCTCCGCTC CCTGCCCTCC
GCTGCATTGT TGTTTGCCGG AACTGCCATT ATTGGGTGCG GGATAGCGCT GGGTAATGTG
CTGCTACCAG GATTGATTAA GCGCGATTTT TCACAACATG TCGCCAGGCT GACGGGCGCG
TACTCATTGA CGATGGGCGC CGCCGCCGCG TTGGGGTCTG CGCTGGTGGT TCCGCTGGCG
TTGCACGGTT TTGGCTGGCG CGGCGCGCTG TTAATGCTAA TGCTGTTTCC GCTGTTGGCG
TTTCTTATCT GGTTGCCGCA GTGGCGCACT ACCCGCTCAG CTAACCTGAG TAGCTCCCGG
GCATTACATG AACGCGGTAT CTGGCGTTCG CCTTTAGCCT GGCAAGTTAC GTTGTTTTTG
GGACTTAACT CACTGATTTA TTATGTAATT ATCGGCTGGT TACCAACAAT ACTCATCAGC
CACGGTTACA GCGAAGCACA GGCAGGATCG CTACATGGCC TGCTGCAACT GGCGACCGCG
GCGCCTGGGT TAGCCATTCC GCTTATTTTG CCTCGCTTTA ACGATCAACG CTGGATTGCC
GCGCTGGTCT CACTCTTGTG CGCAGTGGGC GCGGCGGGGC TTTGGTTTGT GCCGGGCCAG
GCGATCATCT GGACGCTACT GTTCGGCTTC GGTACAGGCG CGACGATGAT CCTCGGCCTG
ACGTTTATCG GCCTGCGCGC CAGTTCGGCG CATCAGGCGG CGGCGCTTTC CGGCATGGCG
CAGTCGGTCG GGTATTTACT GGCGGCATGT GGGCCGCCCG TCATGGGAAA ACTTCATGAT
GCCAGCGGTA GCTGGTATCT GCCGCTATCG GGCGTAACGG TTCTGGCTAT CATCATGGCG
ATTTTCGGCC TCTACGCCGG ACGCGATCGA GAGATAGCGT CATAA
 
Protein sequence
MTTALSPRGK QGALLIAGIL MIATTLRVTF TGAAPLLETI RSDYGLSTAQ TGLLTTLPLL 
AFALVSPLAA GIARRFGMER SLFAAMLLIC AGIALRSLPS AALLFAGTAI IGCGIALGNV
LLPGLIKRDF SQHVARLTGA YSLTMGAAAA LGSALVVPLA LHGFGWRGAL LMLMLFPLLA
FLIWLPQWRT TRSANLSSSR ALHERGIWRS PLAWQVTLFL GLNSLIYYVI IGWLPTILIS
HGYSEAQAGS LHGLLQLATA APGLAIPLIL PRFNDQRWIA ALVSLLCAVG AAGLWFVPGQ
AIIWTLLFGF GTGATMILGL TFIGLRASSA HQAAALSGMA QSVGYLLAAC GPPVMGKLHD
ASGSWYLPLS GVTVLAIIMA IFGLYAGRDR EIAS