Gene SNSL254_A1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1385 
Symbol 
ID6486207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1356229 
End bp1356576 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content51% 
IMG OID642736778 
Producthypothetical protein 
Protein accessionYP_002040532 
Protein GI194445774 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000120257 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATCC AGTGTAAGCG CGTCTATTTC CCGGCGGAAA AAGACGATGG TTATCGGGTA 
TTGGTTGACA GGCTATGGCC GCGAGGCATT AAAAAAGCAG CGCTGGTCTA TGATGAATGG 
AATAAGGCCA TTACGCCCTC CACCGAATTG CGCAAAGCCT TTCATAGCGA ACTGATTGAT 
TTTAACCACT TCGCGCAGCA ATACCGGGCA GAACTTGCGC AACAGCATCA AGAAGGCAAA 
CGTCTGGCGG ATATTGCCCG ACACCAGCCG CTAACGTTGC TATACGCCGC TAAAGATACT 
CGCCAGAACC ATGCCATTGT GCTGGCAGAG TGGCTACGAG AGCTGTGA
 
Protein sequence
MRIQCKRVYF PAEKDDGYRV LVDRLWPRGI KKAALVYDEW NKAITPSTEL RKAFHSELID 
FNHFAQQYRA ELAQQHQEGK RLADIARHQP LTLLYAAKDT RQNHAIVLAE WLREL