Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1369 |
Symbol | |
ID | 6487036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1347613 |
End bp | 1348263 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642736763 |
Product | hypothetical protein |
Protein accession | YP_002040517 |
Protein GI | 194445464 |
COG category | [R] General function prediction only |
COG ID | [COG3443] Predicted periplasmic or secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.366204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.000590755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGTGATTC ATTTAAAAAA ACTGACAATG CTTCTGGGAA TGCTGTTGGT AAATAGTCCT GCCTTCGCGC ATGGTCATCA TGCTCATGGC GCGCCGATGA CGGAGGTTGA GCAAAAAGCG GCAGCGGGCG TGTTTGATGA CGCTAATGTA CGCGATCGCG CGCTCACCGA CTGGGATGGT ATGTGGCAAT CCGTCTATCC TTATCTGGTC AGCGGCGAGC TGGACCCTGT CTTCAGGCAA AAGGCGAAGA AAGACCCGGA GAAAACGTTT GAGGATATTA AAGCGTATTA TCGCAAAGGA TACGCGACGA ATGTTGAGAC TATCGGCATT GAAAATGGCG TTATAGAGTT CCATCGTGAC AATAACGTTG CATCCTGTAA ATACAATTAT GCCGGCTATA AAATTCTGAC TTACGCATCG GGTAAAAAAG GGGTGCGCTA TCTGTTCGAA TGTAAAGATG CGAATAGCAA AGCGCCTAAA TATGTTCAGT TTAGCGATCA TATCATTGCC CCGCGCAAAT CGGCGCACTT CCATATCTTT ATGGGAAATA CCTCGCAACA GGCATTGTTG CAAGAGATGG AAAACTGGCC TACCTATTAT CCTTATCAGT TAAAGGCGAA TGAGGTCGTT GACGAAATGC TACATCATTA A
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Protein sequence | MVIHLKKLTM LLGMLLVNSP AFAHGHHAHG APMTEVEQKA AAGVFDDANV RDRALTDWDG MWQSVYPYLV SGELDPVFRQ KAKKDPEKTF EDIKAYYRKG YATNVETIGI ENGVIEFHRD NNVASCKYNY AGYKILTYAS GKKGVRYLFE CKDANSKAPK YVQFSDHIIA PRKSAHFHIF MGNTSQQALL QEMENWPTYY PYQLKANEVV DEMLHH
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