Gene SNSL254_A1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1369 
Symbol 
ID6487036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1347613 
End bp1348263 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID642736763 
Producthypothetical protein 
Protein accessionYP_002040517 
Protein GI194445464 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.366204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.000590755 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTGATTC ATTTAAAAAA ACTGACAATG CTTCTGGGAA TGCTGTTGGT AAATAGTCCT 
GCCTTCGCGC ATGGTCATCA TGCTCATGGC GCGCCGATGA CGGAGGTTGA GCAAAAAGCG
GCAGCGGGCG TGTTTGATGA CGCTAATGTA CGCGATCGCG CGCTCACCGA CTGGGATGGT
ATGTGGCAAT CCGTCTATCC TTATCTGGTC AGCGGCGAGC TGGACCCTGT CTTCAGGCAA
AAGGCGAAGA AAGACCCGGA GAAAACGTTT GAGGATATTA AAGCGTATTA TCGCAAAGGA
TACGCGACGA ATGTTGAGAC TATCGGCATT GAAAATGGCG TTATAGAGTT CCATCGTGAC
AATAACGTTG CATCCTGTAA ATACAATTAT GCCGGCTATA AAATTCTGAC TTACGCATCG
GGTAAAAAAG GGGTGCGCTA TCTGTTCGAA TGTAAAGATG CGAATAGCAA AGCGCCTAAA
TATGTTCAGT TTAGCGATCA TATCATTGCC CCGCGCAAAT CGGCGCACTT CCATATCTTT
ATGGGAAATA CCTCGCAACA GGCATTGTTG CAAGAGATGG AAAACTGGCC TACCTATTAT
CCTTATCAGT TAAAGGCGAA TGAGGTCGTT GACGAAATGC TACATCATTA A
 
Protein sequence
MVIHLKKLTM LLGMLLVNSP AFAHGHHAHG APMTEVEQKA AAGVFDDANV RDRALTDWDG 
MWQSVYPYLV SGELDPVFRQ KAKKDPEKTF EDIKAYYRKG YATNVETIGI ENGVIEFHRD
NNVASCKYNY AGYKILTYAS GKKGVRYLFE CKDANSKAPK YVQFSDHIIA PRKSAHFHIF
MGNTSQQALL QEMENWPTYY PYQLKANEVV DEMLHH