| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1339 |
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| Symbol | icd |
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| ID | 6482764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1326166 |
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| End bp | 1327416 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736737 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_002040494 |
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| Protein GI | 194446384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.697532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.0115036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGCA AAGTAGTTGT TCCGGTGGAA GGTAAGAAGA TCACCCTGCA AAACGGCAAA
CTCAACGTTC CTGAGAATCC GATTATCCCG TTTATTGAAG GCGATGGTAT CGGTGTTGAT
GTCACTCCAG CCATGCTTAA AGTGGTCGAT GCCGCCGTCG AGAAAGCCTA TAAAGGCGAG
CGTAAAATTT CCTGGATGGA AATTTACACC GGAGAAAAAT CCACACAGGT TTACGGCCAG
GATGTCTGGC TCCCCGCTGA AACCCTTGAT TTGATTCGTG ATTACCGCGT AGCGATTAAA
GGTCCGTTGA CCACGCCGGT TGGCGGCGGT ATTCGCTCTC TGAACGTTGC CCTGCGTCAG
GAGCTTGACC TGTACGTTTG TCTGCGTCCC GTTCGTTACT ATCAGGGCAC GCCAAGTCCG
GTGAAACATC CGGAGCTGAC CGATATGGTC ATCTTCCGTG AAAACTCTGA AGACATCTAC
GCCGGAATTG AATGGAAAGC TGACTCTGCA GACGCTGAGA AAGTGATCAA GTTCCTGCGC
GAAGAGATGG GCGTGAAGAA AATTCGCTTC CCGGAGCACT GCGGTATCGG TATCAAACCG
TGTTCTGAAG AAGGCACTAA ACGTCTGGTT CGCGCGGCGA TTGAATACGC TATTACCAAC
GATCGCGATT CCGTCACGCT GGTACATAAA GGCAATATCA TGAAGTTCAC CGAAGGCGCG
TTTAAAGACT GGGGCTACCA GTTGGCGCGC GACGAGTTCG GCGGTGAGCT TATTGACGGC
GGTCCGTGGC TGAAAATTAA GAACCCGAAC ACGGGTAAAG AGATCGTGGT TAAAGACGTT
ATCGCCGATG CGTTCCTGCA ACAAATCCTG TTGCGTCCGG CGGAATACGA CGTTATCGCC
TGTATGAACC TGAACGGTGA CTATATTTCC GATGCCCTGG CGGCTCAGGT TGGCGGTATC
GGTATTGCAC CGGGTGCGAA TATCGGCGAC GAATGCGCGT TGTTTGAAGC GACTCACGGG
ACTGCGCCGA AATATGCGGG CCAGGATAAA GTCAACCCAG GCTCCATTAT TCTGTCTGCG
GAGATGATGC TGCGCCACAT GCAGTGGTTC GAAGCCGCAG ACCTGATTGT TAAAGGTATG
GAAGGCGCGA TTGCCGCGAA GACCGTGACC TATGACTTTG AACGCCTGAT GGAAGGCGCT
AAGCTGCTGA AATGTAGTGA GTTTGGTGAC GCGATTATCG CGAATATGTA A
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| Protein sequence | MESKVVVPVE GKKITLQNGK LNVPENPIIP FIEGDGIGVD VTPAMLKVVD AAVEKAYKGE
RKISWMEIYT GEKSTQVYGQ DVWLPAETLD LIRDYRVAIK GPLTTPVGGG IRSLNVALRQ
ELDLYVCLRP VRYYQGTPSP VKHPELTDMV IFRENSEDIY AGIEWKADSA DAEKVIKFLR
EEMGVKKIRF PEHCGIGIKP CSEEGTKRLV RAAIEYAITN DRDSVTLVHK GNIMKFTEGA
FKDWGYQLAR DEFGGELIDG GPWLKIKNPN TGKEIVVKDV IADAFLQQIL LRPAEYDVIA
CMNLNGDYIS DALAAQVGGI GIAPGANIGD ECALFEATHG TAPKYAGQDK VNPGSIILSA
EMMLRHMQWF EAADLIVKGM EGAIAAKTVT YDFERLMEGA KLLKCSEFGD AIIANM
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