| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1338 |
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| Symbol | |
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| ID | 6483265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1325329 |
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| End bp | 1326066 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736736 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_002040493 |
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| Protein GI | 194442636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.988595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0256703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGTA ATGAGCATGT CAATACTACC CTATTGTTTG CCGCCATGAA AGACACTCAT
TATTGCGCTA TAATGCGGCA ATTAATAAGT TCTGAAAACA CCATGCAAAA AACTTCTTTT
AGAAATCACT ACGTTAAGCG ATTCAGCTCA CGACAAGCAT CTAAATCACG GAAAGAAAAC
CAGCCAAAAC GCGTGGTTTT GTTCAATAAA CCTTACGATG TGTTGCCGCA GTTCACGGAT
GAAGCAGGTC GCCGCACGTT AAAAGATTTT ATTCCTGTGC AAGGCGTTTA TGCCGCAGGC
CGCCTGGACC GCGACAGCGA AGGGCTTTTG GTGCTGACTA ATGACGGCGC GCTGCAGGCG
CGCCTCACGC AACCGGGCAA GCGCACCGGC AAGATTTACT ATGTTCAGGT AGAAGGCATC
CCGGATAATG CAGCGCTGCA GGCGCTTCGT ACTGGCGTCA CGCTCAACGA TGGCCCTACC
CTGCCCGCCG GTATTGAGAT TGTCGCGGAG CCTGACTGGC TGTGGCCGCG CACCCCGCCG
ATTCGCGAAC GGAAGAATAT TCCCACCAGT TGGCTAAAAG TCACCTTATA TGAAGGCCGC
AACCGCCAGG TAAGACGCAT GACAGCGCAT GTCGGTCATC CCACTCTACG ATTAATTCGT
TACAGCATGG GCGACTACAC GCTCAACGGC CTCGATAATG GACAGTGGCG CGAGATAGCA
CAGGAGAAAG ACAGATGA
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| Protein sequence | MFCNEHVNTT LLFAAMKDTH YCAIMRQLIS SENTMQKTSF RNHYVKRFSS RQASKSRKEN
QPKRVVLFNK PYDVLPQFTD EAGRRTLKDF IPVQGVYAAG RLDRDSEGLL VLTNDGALQA
RLTQPGKRTG KIYYVQVEGI PDNAALQALR TGVTLNDGPT LPAGIEIVAE PDWLWPRTPP
IRERKNIPTS WLKVTLYEGR NRQVRRMTAH VGHPTLRLIR YSMGDYTLNG LDNGQWREIA
QEKDR
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