Gene SNSL254_A1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1336 
Symbol 
ID6484284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1324530 
End bp1324991 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID642736734 
ProductNUDIX family hydrolase 
Protein accessionYP_002040491 
Protein GI194443790 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0415939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC CGCACGTGAC CGTTGCCTGC ATCGTACATG CCGAAGATAA ATTTCTGGTG 
GTGGAAGAGA CCATCAACGG TAAATCGTTA TGGAATCAAC CTGCCGGACA CCTGGAGGCA
GATGAAACGC TGGCGCAGGC CGCCGCGCGA GAACTGTGGG AAGAGACTGG CATCACGGCA
CAACCACAGT ATTTTATCCG TATGCATCAG TGGATTGCTC CGGATAAAAC CCCGTTCCTG
CGCTTTTTAT TCGCTATCAA GCTTGATCAT ATTTGCGCGA CCGAACCCCA TGACAATGAC
ATCGATTGCT GCCGTTGGGT GAGCGCCGAC GAGATTCTGA ACGCGCCGAA TTTACGTTCT
CCGCTGGTGG CTGAAAGCAT TCGCAGTTAT CAAACGGGAC AACGTTACCC CTTATCTATA
GTGGGCGAAT TTAACTGGCC GTTTACAGAG GGTGTCAAGT AA
 
Protein sequence
MFKPHVTVAC IVHAEDKFLV VEETINGKSL WNQPAGHLEA DETLAQAAAR ELWEETGITA 
QPQYFIRMHQ WIAPDKTPFL RFLFAIKLDH ICATEPHDND IDCCRWVSAD EILNAPNLRS
PLVAESIRSY QTGQRYPLSI VGEFNWPFTE GVK