| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1335 |
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| Symbol | mnmA |
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| ID | 6483254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1323370 |
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| End bp | 1324476 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642736733 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002040490 |
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| Protein GI | 194444280 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.0776821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAA GCCCAAAAAA AGTGATCGTC GGCATGTCCG GCGGTGTCGA TTCCTCCGTT
TCCGCCTGGC TGTTGCAACA ACAGGGTTAT CAGGTAGAAG GCCTGTTCAT GAAGAACTGG
GAAGAGGACG ATGGTGAGGA ATACTGTACC GCAGCAGCCG ATCTGGCTGA CGCGCAGGCC
GTGTGCGACA AGCTTGGCAT TGAACTGCAT ACCGTTAATT TTGCCGCAGA ATATTGGGAT
AACGTCTTTG AACTGTTCCT TGAAGAGTAC AAAGCGGGCC GTACGCCGAA CCCGGATATT
CTGTGCAATA AAGAGATCAA ATTTAAAGCC TTCCTTGAAT TTGCCGCAGA AGATTTAGGC
GCCGACTATA TCGCCACCGG TCACTACGTT CGCCGCGCGG ATGTAAACGG CAAAAGCCGG
TTGTTGCGCG GGCTCGACGG TAACAAAGAT CAGAGCTACT TCCTCTATAC ACTTGGCCAT
GAGCAGATTG CGCAAAGTCT GTTCCCGGTT GGCGAGCTGG AAAAACCGCA GGTGCGTAAA
ATCGCCGAAG ATCTGGGGCT GGTAACCGCA AAGAAAAAAG ATTCTACCGG TATCTGCTTT
ATCGGCGAGC GCAAATTCCG CGACTTTTTA GGGCGCTATC TGCCTGCGCA GCCGGGGAAA
ATCATTACCG TTGACGGCGA TGAAATCGGC GAGCATCAGG GTCTGATGTA TCATACGCTC
GGTCAGCGTA AAGGGCTGGG AATCGGCGGC ACCAAAGACG GTAGCGAAGA CCCCTGGTAT
GTGGTGGATA AAGACGTTGA AAACAATGTG TTAATTGTCG CCCAAGGGCA TGAGCACCCA
CGCCTGATGT CGGTAGGCCT CATCGCCCAG CAGCTACATT GGGTCGATCG CGAACCGTTC
ACCGGCACTC TGCGCTGTAC GGTAAAAACC CGCTACCGCC AGACCGATAT TCCGTGCACG
ATTAACGCGC TGGATGACGA TCGTATCGAG GTCATTTTTG ACGAGCCGGT TGCCGCCGTT
ACGCCGGGCC AGTCCGCTGT CTTTTACAGC GGCGAAGTCT GCCTGGGCGG CGGCATTATC
GAGCAGCGAC TGCCGCTGAC GGTCTGA
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| Protein sequence | MSESPKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA
VCDKLGIELH TVNFAAEYWD NVFELFLEEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG
ADYIATGHYV RRADVNGKSR LLRGLDGNKD QSYFLYTLGH EQIAQSLFPV GELEKPQVRK
IAEDLGLVTA KKKDSTGICF IGERKFRDFL GRYLPAQPGK IITVDGDEIG EHQGLMYHTL
GQRKGLGIGG TKDGSEDPWY VVDKDVENNV LIVAQGHEHP RLMSVGLIAQ QLHWVDREPF
TGTLRCTVKT RYRQTDIPCT INALDDDRIE VIFDEPVAAV TPGQSAVFYS GEVCLGGGII
EQRLPLTV
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