Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1326 |
Symbol | potB |
ID | 6483674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1312964 |
End bp | 1313827 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642736724 |
Product | spermidine/putrescine ABC transporter membrane protein |
Protein accession | YP_002040481 |
Protein GI | 194443909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.0226525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACA CAAGTAAATT CCAGAATGTA GTGATTGTCA CTATCGTCGG TTGGCTTGTG TTATTTGTTT TTCTGCCCAA CCTGATGATC ATTGGCACCA GCTTTCTGAC CCGTGACGAC GCCAGTTTCG TCAAGATGGT CTTTACGCTG GATAACTACG CGCGCCTGCT CGATCCGCTC TATTTTGAAG TGCTCCTGCA CTCTCTGAAT ATGGCGCTGA TCGCCACCCT CTCCTGCCTG GTGCTGGGCT ATCCTTTTGC CTGGTTTCTG GCGAAGTTAC CGGAAAAGAT ACGTCCGTTA TTGCTGTTTT TGCTGATTGT TCCTTTCTGG ACCAACTCAC TGATCCGCAT CTATGGGCTG AAAGTATTCC TGAGCACTAA AGGTTATCTC AATGAATTCC TGCTGTGGCT GGGCGTGATT GATACACCGA TTCGCATCAT GTTCACCCCG AGCGCCGTTA TTATCGGCCT GGTTTACATT TTGCTGCCAT TTATGGTCAT GCCGCTCTAC TCCAGCATTG AGAAGCTCGA CAAACCACTA CTGGAGGCCG CACGCGATCT CGGCGCCAGT AAAATGCAAA CGTTCATCCG CATCATTATT CCATTAACCA TGCCGGGCAT TGTCGCCGGT TGCCTGCTCG TGATGCTACC GGCAATGGGC CTGTTCTACG TCTCCGATTT AATGGGTGGC GCGAAAAACC TGCTGATTGG TAACGTCATT AAGGTACAGT TCCTGAATAT TCGCGATTGG CCGTTTGGCG CGGCTACCAG CATTACGCTG ACCATTGTGA TGGGACTCAT GCTGTTGATT TACTGGCGGG CTTCCCGCTT ATTGAATAAG AAGGTGAGTG ATATAAGCGA TTAA
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Protein sequence | MKNTSKFQNV VIVTIVGWLV LFVFLPNLMI IGTSFLTRDD ASFVKMVFTL DNYARLLDPL YFEVLLHSLN MALIATLSCL VLGYPFAWFL AKLPEKIRPL LLFLLIVPFW TNSLIRIYGL KVFLSTKGYL NEFLLWLGVI DTPIRIMFTP SAVIIGLVYI LLPFMVMPLY SSIEKLDKPL LEAARDLGAS KMQTFIRIII PLTMPGIVAG CLLVMLPAMG LFYVSDLMGG AKNLLIGNVI KVQFLNIRDW PFGAATSITL TIVMGLMLLI YWRASRLLNK KVSDISD
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