Gene SNSL254_A1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1321 
Symbol 
ID6482291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1308556 
End bp1309377 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID642736719 
ProductNAD-dependent deacetylase 
Protein accessionYP_002040476 
Protein GI194444178 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0350313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.00447864 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTCGC GTCGGTTTCA TCGATTAAGC CGCTTTCGTA AAAATAAACG TCTGTTGCGT 
GAACGTCTGC GCCAGCGGAT CTTTTTCAGA GACAGAGTGG TGCCGGAAAT GATGGAAAAC
CCAAGAGTAT TAGTCCTTAC AGGTGCAGGA ATTTCTGCAG AGTCTGGTAT TCGTACGTTT
CGCGCGGCGG ATGGCCTTTG GGAAGAGCAT CGGGTTGAAG ACGTGGCAAC GCCGGAAGGA
TTCGCCCGTA ATCCGGGGCT GGTGCAGACA TTTTATAATG CCCGCCGTCA GCAGCTTCAA
CAGCCGGAAA TACAACCCAA TGCGGCGCAT CTGGCGTTAG CGAAGCTTGA AGAAGCGCTT
GGCGATCGCT TTTTGCTGGT GACGCAAAAC ATCGACAATT TGCATGAACG CGCGGGCAAT
CGCAACATCA TTCATATGCA TGGCGAGCTG TTGAAGGTGC GCTGTTCGCA AAGCGGCCAG
ATTCTGGAAT GGAACGGCGA TGTGATGCCG GAAGATAAAT GTCACTGCTG TCAGTTCCCG
GCGCCGCTAC GTCCGCACGT GGTGTGGTTT GGCGAGATGC CGCTTGGCAT GGATGAAATT
TATATGGCGC TGTCGATGGC GGATATTTTT ATCGCCATTG GCACGTCCGG TCATGTCTAT
CCGGCTGCGG GTTTTGTGCA TGAAGCAAAA CTGCACGGCG CACATACGGT GGAACTGAAT
CTTGAGCCAA GCCAAGTCGG CAGCGAGTTT GAAGAGAAGC ACTACGGCCC GGCAAGCCAG
GTTGTGCCGG AATTTGTTGA TAAATTCCTG AAAGGGCTGT AG
 
Protein sequence
MQSRRFHRLS RFRKNKRLLR ERLRQRIFFR DRVVPEMMEN PRVLVLTGAG ISAESGIRTF 
RAADGLWEEH RVEDVATPEG FARNPGLVQT FYNARRQQLQ QPEIQPNAAH LALAKLEEAL
GDRFLLVTQN IDNLHERAGN RNIIHMHGEL LKVRCSQSGQ ILEWNGDVMP EDKCHCCQFP
APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN
LEPSQVGSEF EEKHYGPASQ VVPEFVDKFL KGL