| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1318 |
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| Symbol | lolD |
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| ID | 6485738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1305652 |
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| End bp | 1306353 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642736716 |
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| Product | lipoprotein transporter ATP-binding subunit |
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| Protein accession | YP_002040473 |
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| Protein GI | 194446361 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.113611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.00161216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGA TCCTGTTGCA ATGCGACAAC CTGTGCAAAC GCTATCAGGA AGGCACCGTA
CAAACCGACG TGTTGCACGA TGTCAGCTTC AGTATCGGCG AAGGCGAAAT GATGGCGATC
GTCGGCAGTT CCGGTTCGGG TAAAAGTACG TTGCTGCATC TGTTAGGCGG GCTGGATACG
CCCACCTCCG GCGATGTGAT TTTTAGCGGC CAGCCGATGA GCAAACTCTC TTCTGCGGCA
AAAGCGGAAT TACGTAACCA GAAACTGGGG TTTATCTATC AGTTTCATCA TCTCCTGCCG
GATTTTACGG CGCTGGAAAA CGTGGCGATG CCATTATTGA TTGGCAAAAA GAAACCGGCG
GAGATTGACG CTCGGGCGCG AGAAATGCTG CACGCCGTAG GGCTGGAGCA TCGCGCAACC
CATCGACCTT CGGAACTTTC CGGCGGTGAG CGCCAGCGTG TCGCGATAGC GCGCGCGTTG
GTGAATAACC CGCGTCTGGT GCTGGCGGAT GAGCCGACCG GTAATCTCGA TGCGCGTAAT
GCCGACAGTA TTTTTGAGCT TCTGGGCGAG TTAAATCGTC TGCAGGGAAC CGCGTTTCTG
GTGGTGACTC ACGATTTGCA ACTGGCGAAA CGTATGAGCC GCCAGCTTGA GATGCGCGAT
GGCCGCCTGA CGGCGGAACT GAGCCTGATG GGGGCTGAGT AA
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| Protein sequence | MNKILLQCDN LCKRYQEGTV QTDVLHDVSF SIGEGEMMAI VGSSGSGKST LLHLLGGLDT
PTSGDVIFSG QPMSKLSSAA KAELRNQKLG FIYQFHHLLP DFTALENVAM PLLIGKKKPA
EIDARAREML HAVGLEHRAT HRPSELSGGE RQRVAIARAL VNNPRLVLAD EPTGNLDARN
ADSIFELLGE LNRLQGTAFL VVTHDLQLAK RMSRQLEMRD GRLTAELSLM GAE
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