Gene SNSL254_A1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1296 
SymbolfabF 
ID6484796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1282219 
End bp1283460 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content55% 
IMG OID642736694 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_002040451 
Protein GI194446349 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00111855 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.91621e-19 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTAAGC GTCGTGTAGT TGTGACCGGA CTGGGCATGT TGTCTCCTGT CGGCAATACC 
GTAGAGTCTA CCTGGAAAGC TCTCCTTGCC GGTCAGAGTG GCATCAGCCT GATCGACCAT
TTCGATACTA GCGCCTATGC AACGAAATTT GCTGGCTTAG TAAAGGATTT TAACTGTGAT
GACATTATCT CGCGCAAAGA ACAGCGCAAG ATGGATGCCT TCATTCAATA TGGAATTGTC
GCTGGCGTAC AGGCCATGCA GGATTCTGGC CTTGAAGTGA CGGAAGAGAA CGCAAGCCGT
ATTGGCGCCG CTATCGGCTC CGGTATCGGT GGTCTCGGTC TGATCGAAGA AAACCACAGT
TCGCTGGTAA AAGGCGGACC GCGTAAGATT AGCCCGTTCT TTGTCCCGTC GACGATTGTT
AACATGGTAG CAGGCCATCT GACTATCATG TATGGCCTGC GTGGGCCAAG CATCTCTATT
GCGACTGCCT GTACTTCAGG CGTGCATAAC ATCGGCCATG CCGCGCGTAT CATCGCCTAT
GGCGATGCGG ACGCGATGGT GGCAGGTGGC GCAGAAAAAG CCAGTACGCC GCTGGGTGTA
GGTGGTTTTG GCGCAGCGCG CGCGCTGTCG ACCCGCAACG ATAACCCACA GGCGGCGAGC
CGTCCGTGGG ATAAAGAACG CGATGGTTTT GTACTGGGCG ACGGTGCCGG TATGTTGGTG
CTTGAAGAGT ACGAACATGC AAAAGCGCGT GGTGCGAAAA TCTATGCTGA AATCGTCGGC
TTTGGTATGA GCAGCGATGC TTACCATATG ACGTCGCCGC CGGAAAATGG CGCAGGCGCT
GCGCTGGCGA TGGTTAACGC GTTGCGTGAT GCCGCGATTG AGCCTGCTCA GATTGGCTAC
GTCAACGCGC ACGGCACGTC GACGCCTGCC GGCGACAAAG CTGAGACGCA GGCGGTTAAG
TCAGTCTTTG GCGATGCCGC AAGCCGAGTG ATGGTGAGCT CGACCAAATC GATGACCGGC
CATCTGTTGG GCGCCGCAGG CGCAGTAGAG TCTATTTTCT CTATTCTGGC GCTACGCGAT
CAGGCCATTC CGCCAACCAT TAATCTGGAT AACCCGGATG AAGGTTGCGA TCTGGACTTC
GTGCCGCATG AAGCGCGCCA GGTCAGCGAT CTGGAGTACG CTCTGTGTAA CTCCTTTGGC
TTTGGCGGAA CTAACGGTTC CTTGATTTTT AAAAAGATCT AA
 
Protein sequence
MSKRRVVVTG LGMLSPVGNT VESTWKALLA GQSGISLIDH FDTSAYATKF AGLVKDFNCD 
DIISRKEQRK MDAFIQYGIV AGVQAMQDSG LEVTEENASR IGAAIGSGIG GLGLIEENHS
SLVKGGPRKI SPFFVPSTIV NMVAGHLTIM YGLRGPSISI ATACTSGVHN IGHAARIIAY
GDADAMVAGG AEKASTPLGV GGFGAARALS TRNDNPQAAS RPWDKERDGF VLGDGAGMLV
LEEYEHAKAR GAKIYAEIVG FGMSSDAYHM TSPPENGAGA ALAMVNALRD AAIEPAQIGY
VNAHGTSTPA GDKAETQAVK SVFGDAASRV MVSSTKSMTG HLLGAAGAVE SIFSILALRD
QAIPPTINLD NPDEGCDLDF VPHEARQVSD LEYALCNSFG FGGTNGSLIF KKI