Gene SNSL254_A1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1293 
SymbolfabD 
ID6486855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1280065 
End bp1280994 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID642736691 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_002040448 
Protein GI194446118 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00072041 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value6.6692e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCAAT TTGCATTTGT GTTCCCCGGT CAGGGTTCTC AGAGCGTTGG GATGTTGGCC 
GAAATGGCGG CAAATTACCC TATCGTAGAA GAAACGTTTG CTGAAGCTTC TGCGGCTCTG
GGATATGATC TGTGGGCGCT CACCCAGCAA GGTCCAGCGG AAGAACTGAA TAAAACCTGG
CAGACGCAGC CGGCGTTATT AACCGCTTCC GTCGCGCTTT GGCGCGTTTG GCAGCAGCAG
GGCGGTAAAA TGCCTGCGTT AATGGCAGGT CACAGCCTGG GCGAATATTC CGCGCTGGTT
TGCGCTGGCG TCATCAACTT TGCTGATGCC GTTCGTCTGG TGGAAATGCG CGGTAAATTC
ATGCAGGAAG CGGTTCCGGA AGGCACTGGC GGCATGTCTG CGATCATCGG GCTGGATGAT
GCCTCTATTG CTAAAGCCTG TGAAGAATCT GCCGAAGGGC AGGTTGTTTC GCCGGTTAAC
TTTAACTCGC CGGGACAGGT GGTTATCGCC GGGCATAAAG AGGCGGTAGA ACGTGCGGGC
GCAGCCTGTA AAGCCGCTGG CGCGAAACGC GCGCTGCCGC TGCCGGTGAG CGTACCGTCG
CACTGCGCGC TGATGAAACC AGCGGCAGAT AAGCTGGCGG TTGAATTAGC CAAAATTACC
TTTAGCGCGC CAACGGTGCC GGTAGTAAAC AACGTTGACG TGAAATGTGA AACCGATGCC
GCCGCTATCC GTGATGCGCT GGTTCGCCAG TTGTACAATC CGGTACAGTG GACGAAGAGC
GTGGAATTTA TCGCGGCGCA GGGCGTTGAA CATCTTTATG AAGTGGGTCC AGGTAAAGTC
CTCACTGGTC TGACGAAACG TATTGTCGAC ACCCTGACAG CGTCGGCGCT GAACGAGCCG
GCGGCGCTGT CTGCGGCACT TACGCAATAA
 
Protein sequence
MTQFAFVFPG QGSQSVGMLA EMAANYPIVE ETFAEASAAL GYDLWALTQQ GPAEELNKTW 
QTQPALLTAS VALWRVWQQQ GGKMPALMAG HSLGEYSALV CAGVINFADA VRLVEMRGKF
MQEAVPEGTG GMSAIIGLDD ASIAKACEES AEGQVVSPVN FNSPGQVVIA GHKEAVERAG
AACKAAGAKR ALPLPVSVPS HCALMKPAAD KLAVELAKIT FSAPTVPVVN NVDVKCETDA
AAIRDALVRQ LYNPVQWTKS VEFIAAQGVE HLYEVGPGKV LTGLTKRIVD TLTASALNEP
AALSAALTQ