Gene SNSL254_A1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1285 
Symbol 
ID6484190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1275015 
End bp1275776 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID642736684 
Producthypothetical protein 
Protein accessionYP_002040441 
Protein GI194445364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0098746 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0000000000621008 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAATA CTAGCTGGAT GCGCTCATTT ACTCAGCGTT GGGGAAAATA CGTTATCGTG 
CCGTTCGTTA TCGCGATGTT GGTCGGTTGC GAAGGGAAGG GCGATAGTTC ACGACGGGCT 
TTCGTTGAGT ATTTGAATAC GCAAATCATT ACGTCTCCCG TGGTGGGCGT CTGTGAGTTG 
ACGCCAGCCC AACGTCAGGC TTTTGGTCAT TACGCCGATG ACTACGATGT ACTATTAGCT 
GCCTACGGGC AAATCTTTGC TGTGGTGTAT GAGACCGGCC AGGAGGATAA GATCACCGGT 
GTTATCCAGT CTGAGCGTGA TAATCTGGTT TTCCTGAACG AGCTACGTGT GGCTCGTGAC 
GTAAACAATC GATTTATCCT TCGGTTGAAA AATGTGAGTA GTGAAAACAG AAAAAAATAT 
TCTGCTTTAA AGCTCCCCTC TGATGTGAAG CCTGTCTTTG ACGCTGCGTG GAATAAAACC 
GTAACACCGC TGGATGAGAC GATGACTCGC TATTATTTTC TGCGCGGAAA GCGGCTCGAC 
CAACTGGTCG CAATGGGCGA GTTTCTGCAA AAACAGGGAA ATAAAGTCCG CTTTGAAACG 
AATGGAAAAG CGGTTTTTGC CGACCTGGCA GCAAAAGAAC ACTTTCAGGA TCAACAATTT 
AATTTTTTCA TTACGCAGAA TGATATAAAC CATCTTACTC AGCAGATGGT TGAATTTATA 
AATAGTCAAC AAGATGCGGC GGATGCTGGC GGCGTTAATT AA
 
Protein sequence
MANTSWMRSF TQRWGKYVIV PFVIAMLVGC EGKGDSSRRA FVEYLNTQII TSPVVGVCEL 
TPAQRQAFGH YADDYDVLLA AYGQIFAVVY ETGQEDKITG VIQSERDNLV FLNELRVARD 
VNNRFILRLK NVSSENRKKY SALKLPSDVK PVFDAAWNKT VTPLDETMTR YYFLRGKRLD 
QLVAMGEFLQ KQGNKVRFET NGKAVFADLA AKEHFQDQQF NFFITQNDIN HLTQQMVEFI 
NSQQDAADAG GVN