| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1284 |
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| Symbol | |
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| ID | 6485807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1273918 |
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| End bp | 1274877 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642736683 |
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| Product | 23S rRNA pseudouridylate synthase C |
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| Protein accession | YP_002040440 |
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| Protein GI | 194444187 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0174547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00000000220374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAG AAACGCCATC CGTAAAAATT GTTGCTATCG CCGCTGACGA AGCGGGGCAA
CGCATTGATA ACTTTTTGCG CACCCAACTG AAAGGGGTAC CAAAAAGTAT GATTTATCGC
ATCTTGCGTA AAGGCGAGGT GCGGGTGAAC AAAAAACGCA TTAAACCGGA ATACAAACTG
GAAGCGGGCG ATGAAGTCCG CATTCCGCCG GTTCGCGTTG CTGAACGCGA AGAAGAGGCC
GTGTCGCCGC ATTTGCAAAA AGTGGCGGCG TTGGCGGACG TCATTTTGTA TGAAGACGAC
CATATTCTGG TGCTGAATAA GCCATCCGGC ACCGCCGTAC ACGGCGGGAG CGGGTTAAGT
TTTGGCGTCA TCGAAGGGCT GCGGGCGTTG CGTCCGGAAG CGCGATTCCT GGAACTGGTG
CATCGTCTTG ACCGCGATAC CTCCGGCGTG CTGTTGGTGG CGAAAAAACG CTCCGCGCTG
CGTTCGCTGC ATGAGCAACT GCGCGAAAAG GGAATGCAGA AAGATTATCT GGCACTGGTG
CGCGGCCAGT GGCAATCGCA CGTTAAAACC GTACAGGCGC CATTATTAAA GAACATTCTG
CAAAGCGGTG AACGCATTGT CCGCGTGAGC CAGGAAGGTA AACCGTCAGA AACGCGCTTC
AAGGTGGAAG AGCGCTATGC CTTCGCCACG CTGGTGCGCT GTAGCCCGGT CACAGGCCGT
ACGCATCAGA TTCGCGTCCA TACCCAATAT GCCGGTCACC CTATTGCGTT CGACGATCGC
TACGGCGACC GTGAGTTTGA TCAACAGCTT ACCGAAGCGG GAACCGGTCT TAAACGTCTC
TTTCTGCACG CCGCGGCGCT GAAGTTCACG CATCCGGGAA CGGGCGAAGT CATGCGCATT
GAAGCGCCAA TGGATAACGC CCTGAAGCGC TGTCTACAGG TGCTGCGTAA CGCAAAATAG
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| Protein sequence | MKTETPSVKI VAIAADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRIKPEYKL
EAGDEVRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD HILVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV
RGQWQSHVKT VQAPLLKNIL QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR
THQIRVHTQY AGHPIAFDDR YGDREFDQQL TEAGTGLKRL FLHAAALKFT HPGTGEVMRI
EAPMDNALKR CLQVLRNAK
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