Gene SNSL254_A1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1279 
SymbolflgJ 
ID6484661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1266238 
End bp1267188 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content56% 
IMG OID642736679 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_002040436 
Protein GI194446573 
COG category[M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3951] Rod binding protein 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.814453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.00560108 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGGAG ACGGTAAATT GCTGGCCAGC GCGGCCTGGG ATGCGCAATC TCTGAACGAA 
CTGAAAGCGA AAGCGGGCCA GGACCCGGCG GCGAATATCC GTCCTGTGGC CCGTCAGGTG
GAAGGGATGT TTGTGCAGAT GATGCTGAAA AGTATGCGCG AGGCTTTACC CAAAGATGGT
TTATTCAGCA GCGATCAGAC GCGTCTGTAT ACCAGCATGT ATGACCAGCA GATCGCCCAG
CAGATGACTG CCGGCAAGGG ATTGGGGCTG GCGGATATGA TGGTTAAACA GATGACGGGC
GGGCAGACGA TGCCTGCAGA TGATGCGCCG CAAGTACCGC TTAAATTCTC CCTGGAGACG
GTAAACAGCT ATCAAAATCA GGCGCTGACC CAACTGGTGC GCAAAGCCAT ACCGAAAACG
CCGGACAGCA GCGATGCGCC GCTCTCCGGC GACAGTAAAG ACTTTCTGGC CCGGCTTTCG
CTCCCGGCGA GGCTGGCCAG CGAACAAAGC GGGGTGCCGC ATCATCTGAT TCTGGCGCAG
GCGGCGCTGG AGTCCGGCTG GGGGCAGCGG CAAATCCTGC GGGAGAATGG CGAACCCAGC
TATAACGTAT TTGGCGTGAA AGCGACCGCC AGTTGGAAAG GGCCGGTGAC GGAAATCACC
ACCACTGAAT ACGAAAATGG CGAAGCGAAA AAAGTGAAAG CGAAATTCCG CGTCTATAGC
TCGTATCTGG AGGCGTTATC GGATTATGTC GCGCTGTTAA CGCGTAACCC ACGCTACGCT
GCCGTGACCA CTGCCGCCAC GGCAGAGCAA GGCGCAGTGG CCCTGCAAAA CGCCGGATAC
GCCACTGACC CGAATTACGC GCGTAAATTG ACCAACATGA TTCAGCAGTT GAAAGCGATG
AGTGAAAAGG TCAGCAAAAC CTACAGCGCG AATCTCGACA ATCTCTTTTA A
 
Protein sequence
MIGDGKLLAS AAWDAQSLNE LKAKAGQDPA ANIRPVARQV EGMFVQMMLK SMREALPKDG 
LFSSDQTRLY TSMYDQQIAQ QMTAGKGLGL ADMMVKQMTG GQTMPADDAP QVPLKFSLET
VNSYQNQALT QLVRKAIPKT PDSSDAPLSG DSKDFLARLS LPARLASEQS GVPHHLILAQ
AALESGWGQR QILRENGEPS YNVFGVKATA SWKGPVTEIT TTEYENGEAK KVKAKFRVYS
SYLEALSDYV ALLTRNPRYA AVTTAATAEQ GAVALQNAGY ATDPNYARKL TNMIQQLKAM
SEKVSKTYSA NLDNLF