Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1279 |
Symbol | flgJ |
ID | 6484661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1266238 |
End bp | 1267188 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736679 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_002040436 |
Protein GI | 194446573 |
COG category | [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3951] Rod binding protein |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.814453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.00560108 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGGAG ACGGTAAATT GCTGGCCAGC GCGGCCTGGG ATGCGCAATC TCTGAACGAA CTGAAAGCGA AAGCGGGCCA GGACCCGGCG GCGAATATCC GTCCTGTGGC CCGTCAGGTG GAAGGGATGT TTGTGCAGAT GATGCTGAAA AGTATGCGCG AGGCTTTACC CAAAGATGGT TTATTCAGCA GCGATCAGAC GCGTCTGTAT ACCAGCATGT ATGACCAGCA GATCGCCCAG CAGATGACTG CCGGCAAGGG ATTGGGGCTG GCGGATATGA TGGTTAAACA GATGACGGGC GGGCAGACGA TGCCTGCAGA TGATGCGCCG CAAGTACCGC TTAAATTCTC CCTGGAGACG GTAAACAGCT ATCAAAATCA GGCGCTGACC CAACTGGTGC GCAAAGCCAT ACCGAAAACG CCGGACAGCA GCGATGCGCC GCTCTCCGGC GACAGTAAAG ACTTTCTGGC CCGGCTTTCG CTCCCGGCGA GGCTGGCCAG CGAACAAAGC GGGGTGCCGC ATCATCTGAT TCTGGCGCAG GCGGCGCTGG AGTCCGGCTG GGGGCAGCGG CAAATCCTGC GGGAGAATGG CGAACCCAGC TATAACGTAT TTGGCGTGAA AGCGACCGCC AGTTGGAAAG GGCCGGTGAC GGAAATCACC ACCACTGAAT ACGAAAATGG CGAAGCGAAA AAAGTGAAAG CGAAATTCCG CGTCTATAGC TCGTATCTGG AGGCGTTATC GGATTATGTC GCGCTGTTAA CGCGTAACCC ACGCTACGCT GCCGTGACCA CTGCCGCCAC GGCAGAGCAA GGCGCAGTGG CCCTGCAAAA CGCCGGATAC GCCACTGACC CGAATTACGC GCGTAAATTG ACCAACATGA TTCAGCAGTT GAAAGCGATG AGTGAAAAGG TCAGCAAAAC CTACAGCGCG AATCTCGACA ATCTCTTTTA A
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Protein sequence | MIGDGKLLAS AAWDAQSLNE LKAKAGQDPA ANIRPVARQV EGMFVQMMLK SMREALPKDG LFSSDQTRLY TSMYDQQIAQ QMTAGKGLGL ADMMVKQMTG GQTMPADDAP QVPLKFSLET VNSYQNQALT QLVRKAIPKT PDSSDAPLSG DSKDFLARLS LPARLASEQS GVPHHLILAQ AALESGWGQR QILRENGEPS YNVFGVKATA SWKGPVTEIT TTEYENGEAK KVKAKFRVYS SYLEALSDYV ALLTRNPRYA AVTTAATAEQ GAVALQNAGY ATDPNYARKL TNMIQQLKAM SEKVSKTYSA NLDNLF
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