Gene SNSL254_A1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1278 
SymbolflgI 
ID6484880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1265141 
End bp1266238 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID642736678 
Productflagellar basal body P-ring protein 
Protein accessionYP_002040435 
Protein GI194444645 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00286836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTTAAAG CTCTTGCAGG AATCGTTCTG GCACTGGTTG CCACTCTGGC GCACGCCGAG 
CGTATCCGGG ATCTGACCAG TGTCCAGGGA GTACGGGAAA ACTCGCTGAT CGGCTACGGG
CTGGTGGTCG GGCTGGACGG TACGGGCGAC CAGACGACCC AGACGCCATT TACCACCCAG
ACGCTGAATA ACATGCTGTC ACAACTGGGG ATTACGGTCC CCACCGGCAC CAATATGCAG
TTGAAAAACG TGGCGGCGGT GATGGTGACG GCGTCGTATC CGCCTTTTGC GCGACAGGGA
CAAACGATCG ATGTCGTCGT TTCCTCAATG GGGAACGCTA AAAGTCTGCG TGGCGGGACG
TTATTAATGA CGCCGTTAAA AGGGGTGGAC AGCCAGGTGT ATGCTCTGGC GCAGGGCAAT
ATTCTGGTCG GCGGCGCGGG CGCTTCCGCA GGCGGCAGTA GCGTGCAGGT TAACCAGCTT
AATGGCGGGC GCATCACTAA TGGCGCGATT ATCGAACGCG AGTTGCCGAC TCAGTTCGGC
GCTGGCAACA CTATTAATCT GCAATTGAAC GACGAAGATT TTACGATGGC GCAGCAAATT
ACCGACGCCA TCAACCGCGC CCGCGGTTAC GGCAGCGCCA CTGCGCTTGA TGCGCGAACG
GTACAGGTAC GCGTGCCCAG CGGCAACAGC TCGCAGGTGC GTTTTCTGGC GGACATTCAA
AATATGGAAG TCAACGTGAC GCCGCAGGAT GCAAAAGTCG TGATCAACTC GCGTACCGGT
TCGGTGGTCA TGAATCGGGA AGTCACGCTG GATAGCTGCG CTGTGGCGCA GGGCAATTTG
TCAGTGACAG TCAATCGCCA GCTCAACGTC AACCAGCCGA ATACGCCATT TGGCGGCGGG
CAGACCGTGG TGACGCCACA GACTCAAATA GATTTGCGTC AGAGCGGCGG ATCGCTACAG
AGCGTGCGTT CCAGCGCCAA TCTGAACAGC GTAGTGCGCG CGCTGAATGC GCTTGGCGCG
ACGCCGATGG ACCTGATGTC GATTTTGCAG TCCATGCAGA GCGCGGGCTG TCTACGCGCC
AAACTGGAAA TCATCTGA
 
Protein sequence
MFKALAGIVL ALVATLAHAE RIRDLTSVQG VRENSLIGYG LVVGLDGTGD QTTQTPFTTQ 
TLNNMLSQLG ITVPTGTNMQ LKNVAAVMVT ASYPPFARQG QTIDVVVSSM GNAKSLRGGT
LLMTPLKGVD SQVYALAQGN ILVGGAGASA GGSSVQVNQL NGGRITNGAI IERELPTQFG
AGNTINLQLN DEDFTMAQQI TDAINRARGY GSATALDART VQVRVPSGNS SQVRFLADIQ
NMEVNVTPQD AKVVINSRTG SVVMNREVTL DSCAVAQGNL SVTVNRQLNV NQPNTPFGGG
QTVVTPQTQI DLRQSGGSLQ SVRSSANLNS VVRALNALGA TPMDLMSILQ SMQSAGCLRA
KLEII